Cryptomeria japonica (Japanese cedar): 131049999
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Entry
131049999 CDS
T10556
Name
(RefSeq) protein RDM16
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040
Spliceosome
Brite
Spliceosome [BR:
cjf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
131049999
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GFIT
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NCBI-GeneID:
131049999
NCBI-ProteinID:
XP_057840106
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Position
9:complement(247924265..247956157)
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AA seq
899 aa
AA seq
DB search
MNDLSRSRGRDRERDKGGDERQHMDHDRVKRHSHDDEDDNRHRYSSSRDDRRHRDRKDHK
ESRKIKDRADDSYAQGRKIEDGYREGERSSSHQGKEKDRDLRSHRDSAERAKRSYEGRDG
GERDRDSRPHKRREREDGDDRKEKRHRVAAAEDDGDDAKARDRGEKRKFQENDSKTKDDN
DEYRKEKKHASGREGRGEEHYGDSKQNIVGPDNGSASTSFNGVQQGVTVLASKESSRDLP
KPIAISEFSTDTKVSTVFTTNVVENKADNIARSHEVIGNTSTDGTAATSKGGNLSLDALA
KAKKALQIQKELSEKLKKLPQLNKSTGTSSVASSSAALALAGESASLKALAQAPTSSSVP
SAMTTLATVQSKVSASVASMSAIPASAGNINFAPGMTGVAGLMPGHANIPNYEAVKRAQE
LAARMGFHQDPESMPFLNMFPGQMSDEFGTAGQQKPAKAPVLRLDAQGREIDEHGNVIDK
PKITNLSTLKVNINKQKKEAFQILRPELDEIPATNPHFDARMGIDKTKLVRPKRMTFQFV
EEGKWSKQAEILKFKSQFGEAQAKELKIKQAQLAKAKAELDINPNLIEVSERFPTKEEKP
KDPIPDVEWWDTVLLPSSSYTDVTEGELKVKMEKLTIYVEHPQPIEPPAEPPPPPPQPLK
LTKREQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGAEATQDPTKLEME
IRSAAAEREQAHVDRNIARKLTPAERCEKKERKLFDDPNTLETIVSVYKITDLSHPQTRF
KVDVNAQENRLSGCAVISDNMSVVVVEGGSKSIKRYGKLMLHRINWAAAVVKEEDEDEDD
GRPVNKCQLVWQGSVAKQSFNRFVIQQCRTEAAARKFFADSGVVHYWDLAVNFSEDQIS
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatctaagcagaagcagaggcagagatagagaaagagacaaaggtggggatgag
agacagcacatggatcacgatagggtgaagaggcattcccatgacgatgaggacgacaac
aggcacagatattcttcttcaagggatgacagacggcacagagataggaaggatcataaa
gagagtaggaagatcaaggacagggcagacgatagctacgcccaaggcagaaagatcgaa
gacggttacagagagggggagagatcctcatctcaccaagggaaagagaaggacagggat
cttcgatctcacagggacagtgcagaaagggccaaacgctcttatgagggcagagacggc
ggagaaagagaccgcgacagccgccctcacaagcggcgagaaagagaagatggggatgac
aggaaagagaagcgccacagagtggcagcagcagaggatgatggtgatgatgccaaggcc
agagatagaggggagaagaggaaattccaagagaatgattccaaaaccaaggatgataat
gacgaataccgaaaggagaaaaaacatgcgagtgggcgagaaggaagaggagaagaacat
tatggcgattcaaaacagaacatcgttgggccagacaatggcagtgcttccacctctttc
aatggtgttcaacaaggtgtaactgttctggcatcaaaggaatcatcaagggatttgcca
aagcccatagccatttcggaattttctacagacacaaaggtatctacagtttttaccacc
aatgtagttgaaaataaggcagataatattgccagatctcatgaggttattgggaacacc
agcacagatgggactgcagcaactagcaaaggtggaaatttgtctcttgatgctttagcc
aaggcaaagaaggcactgcaaatacagaaggagctttcagaaaagttgaagaaattgcct
cagttgaataagtctactggtacaagttctgttgcatcgtcatctgcagcacttgctctt
gcaggagagtcagcatctctgaaggcactggctcaggcaccaacatccagttctgtgcct
tcagccatgacaactttggctacagttcagtctaaagtatctgcatcagtagctagtatg
tcagctattccagcatctgcaggaaatattaactttgcacctggaatgactggagtggca
ggtcttatgccaggtcatgcaaatattccaaattatgaagcagtaaaaagagcacaagaa
cttgcagcaagaatggggtttcaccaggatccggaatcgatgccatttttgaacatgttt
cctggtcaaatgtctgatgaatttggtactgctggccagcaaaaacctgcaaaggctcct
gtgcttcgtcttgatgcacagggtcgtgaaatagatgagcatggcaatgtcattgacaaa
ccaaaaataacaaacttaagcacactaaaggttaatattaacaaacagaaaaaggaagca
tttcaaatcctaaggccagaactggatgaaattccagcgacaaatccacatttcgacgca
agaatgggtattgataaaacaaagcttgttaggcctaagaggatgacatttcaatttgtt
gaggagggaaaatggtctaaacaggcagaaatactgaaatttaagagtcaatttggagaa
gctcaagctaaggagctgaagattaaacaagcccagcttgcgaaggcaaaggctgagcta
gatatcaatccaaatctgatcgaagtgtctgaaagatttcctacaaaggaagaaaaacca
aaggatccgatacctgatgtggagtggtgggacacagttttgttaccttccagcagctac
actgatgtcactgaaggtgaactcaaagtgaagatggaaaagcttaccatatatgtagag
catcctcagccaattgagcctcctgcagaaccgcctccaccaccccctcaacctctaaag
ctgacaaagagggagcagaagaaattacgtacacagcggcgacttgcaaaggaaaaggat
aggcaggagatgataagacagggtctgatagagcctccaaagccaaaagtaaagatgagc
aatcttatgaaggtccttggagccgaagcaacccaagatccgacaaaacttgaaatggaa
attcgcagtgctgctgctgaacgtgagcaggcgcatgtggacagaaatattgctcgcaag
ctcaccccagctgaacgttgtgagaagaaagaaagaaagctctttgatgatccaaatacc
ttggaaacaattgtttctgtctacaagattactgacttgtcgcaccctcagacacgcttc
aaagtggatgtcaatgctcaggagaatagattatctggttgtgcagttatctcagataac
atgagtgttgtagttgttgaagggggtagcaagtccattaaaagatatgggaaactgatg
cttcaccgcatcaactgggctgctgctgttgtgaaggaagaagatgaagatgaagatgat
ggtcgtcctgtcaataaatgtcaactagtttggcagggtagtgtggccaaacaaagtttt
aatagatttgtgattcagcagtgcagaactgaagcagcagctcgtaaattttttgctgat
tctggcgtggtacactattgggaccttgcagttaatttttctgaagatcaaatttcttag
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