Cryptomeria japonica (Japanese cedar): 131050480
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Entry
131050480 CDS
T10556
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjf03041
]
131050480
Spliceosome [BR:
cjf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131050480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF5052
Motif
Other DBs
NCBI-GeneID:
131050480
NCBI-ProteinID:
XP_057840658
LinkDB
All DBs
Position
10:complement(912001168..912033660)
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AA seq
489 aa
AA seq
DB search
MASSAGQPQFRYTQPPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANHNQAFV
EFADLNQAIAMVSYYASSSEPAQVRGKSVYLQYSNRQEIVNNKSTGDVASNVLLVTIEGV
EAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFTDPDTATAARNALDGRSIPRYL
LPDHVTSCHLRISFSAHTDLNVKFQSHRSRDYTNPNLPVNPSAIDGQFTIGPDGKRKELE
SNVLLASIENMQYAVTVDVLNTVFSSFGTVQKIAIFEKNGGFQALIQYPDIGTAVVAKEA
LEGHCIYDGGYCKLHLSYSRHTDLNVKGNNDRSRDYTTPASGILPTQPSPLTVPSPTNVG
GWQGPPSAPMYSPNGFGGVPCPPQQGGISGPQQMQGWGEYNQSQVSSQMPGPNALSSPSY
VGQGPVRSPAMPTPPGIGGNNIGTSPFQPSSHSPHPGPPPMPQYSSQPMHMPMSGGAPPQ
NGGASGYYM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcagcgggtcagcctcagtttcgctacacgcagcctccgtcgaaggttttg
catctcagaaatctgccgtgggaatgcacggaagaggagctcgtagagctttgtaaaccc
tttggcaaaattgtcaacactaaatgcaacgtgggagccaaccataaccaggcattcgtt
gaatttgcagatttgaatcaagccattgcaatggtttcatattatgcttcatcatcagag
ccagctcaggtacgaggcaaaagcgtttacctgcagtactcaaataggcaagaaattgta
aacaataaaagcactggggatgttgccagcaatgttttattggtgacaattgagggtgtc
gaggctggggatgtcagcattgatgtcttgcatttggtcttttcagcctttggtttcgtg
cataagattgctacgtttgagaagagtgcaggatttcaggcactggtgcagtttactgat
ccagacactgctactgctgcaagaaatgccctcgatggaagaagcattccgagatatttg
cttccagatcatgtgacttcatgccacctgcggatatcattttctgcacacactgactta
aatgtcaaatttcagagtcatcggagcagagattacaccaatcccaaccttcccgtgaat
ccttctgcaatagatgggcagtttaccataggacctgatggaaagagaaaggagcttgag
agtaatgttcttctcgcgtccatcgaaaacatgcaatatgcagtgacagttgatgtttta
aacacggtgttttcatcatttggaactgttcagaagattgccatatttgagaagaatgga
ggatttcaggcattaattcaatatccagatattggtactgctgtggttgctaaggaagcg
ctagaaggacattgcatctatgatggaggttattgcaaactccacctgtcttattctcgt
cacactgacttaaacgtaaagggtaataatgatcgcagcagagattatacaactccagca
tctggcatattaccaacccaaccatctcctttaacagttcccagcccaaccaacgttggt
ggatggcaaggtcctccatctgctccaatgtactcgccaaatgggtttggtggtgttcct
tgtccaccacagcagggaggtatttctgggcctcagcaaatgcagggatggggggagtac
aatcagtcacaggtatcctctcaaatgccaggacctaatgctttatcatctccatcttat
gtgggacaaggtccagttcggagtcctgctatgccaactcctccagggattggaggaaat
aatatagggacaagtcctttccaaccatctagtcacagtcctcaccctggccctccccca
atgcctcaatatagcagtcagccaatgcacatgccaatgtctggaggtgctcctccacaa
aatggtggtgcttccggatattacatgtaa
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