Cryptomeria japonica (Japanese cedar): 131050592
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Entry
131050592 CDS
T10556
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
131050592
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
HECT type E3
131050592
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131050592
NCBI-ProteinID:
XP_059066241
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Position
8:170816218..170823230
Genome browser
AA seq
1484 aa
AA seq
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MEQDFLLGSSNSQLHSILCTLQDEEADDITQIAALTNLCEILAMASEEFHVDSFIPISVR
YLKQGSPEIKLLATRSLTYICDIFPWYCSNVVFEGAIPVMCEHLLTSYYLDLAEESVLAL
EKIARRRASNCLRDGAFMALLLNLNIFSSAIKKHALSTAAEISLELSPSTIGLVMEEVPI
LLGVLSDPDAKMVEHACVCLSQIARAAAASQKNLEEISNYGLVAKAISLISVTNSVSGQA
SLSSPGFMAVIGLLSTCASASAVLAGQMIEMGISSILRDILTASGIVSQITIPLFSNNST
NQLQKIVSFVNDLLPSVSNEKISLPTSDERDDRDNSAREKLFQEKPELLVQFGMNLFQLM
IQIYGPSINAQVSRQCLKVISKLLYLSTPEILQPLLKETNISRFLAGILSGKDFEISLAA
LQMAEILIQKLPDIMFNMFMREGVFHAVGTLISTGSTVSGEDKTHTTWNTWSESEEESEV
NQIEEIVNAHARQFKATYFVSNSGARATKSFCKLINLCKKLDRALCDLMGKSMKAKQSRV
EYKSHYGLNGKFEGNAKQGVGISKRKGKRSCAVTDNNEIPSIIANILAELCQDDGVSTFE
FVKSGVVASLLNYFAGRDLKRDKMLKADSIEHQLETMKRLETFVDISLPLIVHGKETPLT
VLVRKLQDALSSEDFPIQDNNDLLKLRLCRAQEERCLSSHPRNILYVEPLARIADIEDYL
CRRLQINKTETTCTSSVAEPRTHVTTTEAAAEGISSARSRPSTTTENSTNCTLSKGGESV
SSSVTTDFNDKQIRIGASMGDALEREPQLKQEQGGSTDEGLLEEPTSVCVIDGANGVLLS
DPADASGIEGVPTIRASSICSKGSSRSREHPTLNFFIGGKLLDRSSTVYEAIQKSVQVEG
DDPNHSDSKWINESIQHKVHKIRYKKANKPRERNLTEKHQMYARLMKLKNLPCIGKILQG
TLPYNIGEKDSTNDILLLLQILDEINKLAPCLRANSLSDAFAKGRLKSLDKLKANGPTVP
QQEFFSGKLTPKLAYLLKDAEALATFRLPNWYNQLIENCPFLFPFEIRRQYFMLCASHEI
PPDPYLRNNDAVRLPRLKVRVSRKHVLKAAAQVMHLCRGQKVALEIQYNNEVGSGLGPTL
EFYTLISHELQRSKIGMWRTNAEESVQASLGLFPRPYSPHTESSDSEKFHVIENFTLLGF
LMAKALQDGRLLDLPLSRAFYKLLLGNDLDLYDIKYFDIGLGTILQEMQALAARRQYLES
MADDKSKEISSLHYRGANIEDLCFDFTLPGFPDYPLKPGGSSIMVTIDNIDEYVSLAVDA
TIASGIMPQIEALRKGFNQVFPISTLQVFSEKELETLICGERDLWEAEMLCDHIKFDHGY
TAQCPFALDFLEIVAAFTPKLQRAFLQFVTGSPNLPPGGLSSLNPQLTVVRKNPVNLTEA
VDMDLPSVMTCANYLKLPPYSTKETMRDRLVYAITEGQGSFDLS
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggattttcttttgggaagttctaattctcagttacactctattctatgtact
ctacaagacgaagaagcagatgatatcactcaaattgcagctctgactaacctctgcgaa
attctggctatggcgtctgaagagtttcatgtggattcttttattccaatttcagtaagg
tatttgaagcaggggagtcctgaaatcaaactattggctactagaagtttaacatacatt
tgcgatattttcccctggtattgctcgaatgttgttttcgaaggtgcgattccagtaatg
tgtgagcacttgctcacgtcatattacttggatttagcagaggagtctgtactggcattg
gagaagatcgctcgcaggcgtgcatctaactgccttcgtgatggtgcttttatggcacta
ttgttaaatctgaatattttttctagtgctattaagaaacatgcattgtcaactgcggca
gaaattagcttagagctttcaccatctaccattggtttggttatggaagaagttccgata
ctgttgggtgttttatcagatcctgatgctaagatggtagaacatgcatgtgtctgttta
tctcaaatagcaagagctgcagctgcttctcaaaagaatttagaagagatttctaactat
ggcctggtagccaaagctataagtttgatatctgtcaccaactcagtcagtggccaggca
tctcttagttcaccaggattcatggctgtgattggactgctttcaacatgtgcaagtgct
tctgctgtattggcagggcaaatgattgaaatgggcatctctagcatccttagggatatt
cttactgcttctggcattgtatcgcagattacaattcctctgttttcaaacaattcaact
aatcagttgcagaagattgtctcctttgtgaatgatcttcttccatccgtatccaatgag
aaaatttcacttcccaccagtgatgaacgtgatgatagagataactccgctagagaaaag
ctatttcaagaaaaacctgagcttttggtgcaatttggaatgaatctttttcaacttatg
attcagatatatggtccaagcatcaatgctcaagttagccgccaatgtctgaaagttatc
agcaaactattgtacctcagcactccagagattttgcagccattattaaaggaaaccaac
atatcaagatttttggcgggaattttatctggcaaagattttgaaatttcacttgcagca
ttacagatggcggaaattttaattcagaaacttccggacattatgttcaatatgttcatg
agagaaggtgtttttcatgcagtgggtacacttatatctacagggagcactgtctcagga
gaggataaaactcatacaacatggaatacatggtcagaaagtgaagaagaaagtgaagta
aatcaaatagaagaaattgtcaatgctcatgcaaggcaatttaaggctacatactttgtt
tcaaattcaggggctagagctacaaaaagtttttgcaagttgataaatctttgtaagaag
ttagatagggccttgtgtgatttgatgggtaaatcaatgaaggccaaacagagtagggtt
gaatataaaagtcattatggtttaaatggcaaatttgaaggcaacgccaaacagggcgtg
gggatatcaaaacgaaagggtaaaagaagttgtgctgtcactgataacaacgaaatacca
tcaatcattgctaatattctggccgaactatgccaagatgatggcgtatcaacttttgag
tttgttaaaagtggggttgtggcatccttactaaattattttgcaggcagggacttgaaa
agagataagatgttaaaagctgattccattgagcatcagttagaaacaatgaaaagactc
gagacatttgttgatatctctcttcctctgattgttcatggaaaagaaactcctttgacg
gttttagttcggaagctgcaggatgcactttcctccgaagattttcctatacaagacaat
aatgatcttctaaaactgcggttgtgtagagcacaagaagaaagatgtttgagtagccac
cctcgaaatattttatatgtagagcctttggctaggatcgctgatattgaagattatcta
tgtcgtagattgcagataaataaaactgaaaccacttgtactagtagcgtggctgagcct
cgtacccatgtaacaactacagaagctgctgcagaaggaatatcctcagcaagatcaagg
ccatcaaccacaacggaaaattctaccaattgtacactatcgaaaggaggagaatcagtc
tcaagcagtgttacaactgatttcaatgacaaacaaataagaattggggcttcaatggga
gatgccttagagagagaaccacaactaaaacaagagcaaggaggatctactgatgaggga
ttgttggaggaaccaacttcagtttgtgtgattgatggggcgaatggcgttttgttgagt
gatcctgcagatgcaagtggaatagaaggtgttccaacaataagagcatcatctatttgt
tcaaaaggatccagcagaagtagggaacatcctacgctgaattttttcattggaggtaaa
ctgctagatagatcatcaacagtatatgaagcaattcaaaaaagtgtgcaagttgaagga
gacgatccaaatcattctgattcaaaatggataaatgaatcgattcagcataaagtgcat
aaaattagatataagaaagcaaacaaaccccgagagaggaatttgactgaaaaacatcaa
atgtatgctagactgatgaaattgaagaatttgccttgtattggcaaaattttgcaagga
acgctaccctataatataggagagaaggatagcacaaacgatattctattgctgcttcaa
attcttgatgaaataaacaaattagctccttgtttgagagctaacagcttatctgatgca
tttgcaaaagggagattgaaaagcctagataaattgaaagctaatggtcccacggttcct
caacaagaattttttagtggcaagcttactccaaaactagcatatctgctaaaagatgca
gaggcattggctactttccgtttgccaaattggtataaccagttgattgaaaactgccca
tttttgtttccatttgagataagaaggcaatattttatgctttgtgcatcacatgagatt
cctccagatccctatttgagaaacaatgatgctgttaggctaccacgcctaaaggttcgt
gtttcacgaaagcatgtattaaaggcagctgcacaagtgatgcatttgtgccgagggcag
aaggttgctcttgaaattcagtataataatgaggttggcagcggtctgggtccaactctt
gagttctatacacttataagtcatgaattacagaggagtaaaattggaatgtggaggaca
aatgcagaggaatcagttcaggcatctctgggattattccctcgtccttactcacctcat
acagagtcttctgacagtgaaaaatttcatgtgatagagaatttcacccttcttgggttt
ctaatggctaaagctcttcaggatggccgacttctggatttgcctctttccagagcattt
tataagctgcttcttgggaatgatcttgatttatatgatatcaagtactttgacattggg
ctaggaacaatactgcaagaaatgcaagctcttgctgctcgaaggcaatacttggagtca
atggcagatgataagagcaaagaaatatcaagtttacattaccgtggtgcaaacattgaa
gacctttgctttgatttcacccttcctggcttcccggactaccctctcaaaccaggaggg
agcagcatcatggttaccatagataacatagatgagtatgtttcattggctgtggatgca
actattgcttcaggaatcatgccacaaattgaggcccttcgaaaagggtttaatcaggtg
tttcccatctcgactttgcaagtattttcagaaaaggaattggaaactcttatatgtggg
gagcgtgacttatgggaggctgaaatgctatgtgatcacatcaaattcgatcatggttat
acggctcaatgtcctttcgcattggattttcttgagatcgtggcagcattcacaccaaag
ctgcaaagagcatttttgcagtttgttactggttctccaaaccttcctccagggggtctg
agttctctaaatccacaattgactgttgttcgcaaaaatcccgtcaatttaacagaggct
gttgatatggacttgccaagtgttatgacttgtgcaaattaccttaaacttcccccatac
tcaaccaaggagacaatgcgtgatagactggtatatgccattaccgaagggcaaggatct
ttcgatctctcataa
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