Cryptomeria japonica (Japanese cedar): 131050611
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Entry
131050611 CDS
T10556
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjf03000
]
131050611
04121 Ubiquitin system [BR:
cjf04121
]
131050611
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
131050611
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
131050611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
131050611
NCBI-ProteinID:
XP_057840789
LinkDB
All DBs
Position
8:complement(172000127..172003666)
Genome browser
AA seq
992 aa
AA seq
DB search
MEMGASTEDVKITNNSGRQNSYGDNGRRAWIPRGRGNHNQNPNPNTNGRRVWTPRGRGRA
SKCGHNSSSQDLMLPMNDRKHPSQSVHHKRSEMEDLGLMNRSSSQDWRYHAPSSEVNARP
LLKQESEEVIHLERSNVPNLVQEIERKLQQSKVECMICYEMVGKSAAIWSCNSCYALFHL
HCIRKWARAPTSRDLSAGQSQRSNWRCPGCQSVQYSRPEDLQYYCFCGKMQNPYNDFYLT
PHSCGEPCGKSLDKGKELSRCPHTCTLLCHPGPCPPCTAMAAPQPCPCGKKTTTRRCSDQ
KPAETCGQVCEQLLTCGRHLCDKICHEGPCGSCTILTNASCFCGKKENMMLCGDLEFHGE
LEWKSGVYACENLCMKMLSCQNHNCSLGCHPGECKECDLLPEKLKTCPCGKTQILNQRKS
CLDPVPTCSEVCEKLLPCGKHKCINSCHQGICPPCLVSVDQKCRCGSSSRKVSCWKTTSV
TKDNKEFLCEKVCGQKKNCGRHRCNEKCCSLSHRGRSAIQTGDWDPHLCLMPCGKKMRCG
QHYCQELCHSGYCPPCLETNFTDLSCACGKTSIPPPVPCGTPIPSCAYPCSIPQPCGHSA
THNCHLGECPPCTASAAKKCVGSHVILRNVLCGSREIKCNKLCGKTRQCGMHACTRTCHI
PPCDPVSMESSSSKARISCGQTCGASRRDCKHTCISLCHPPRPCPDTRCTFPVTITCSCG
RMTAKVPCDAGGNNIRADPVFEASIYHKLPAPLQPTESHLTRVPMGQRKLACDDECAKLE
RKKTLANAFDISTTVDLQEVNGKTSEMLADLIRREPQWVSDVEDRFKYLVLGRTKINTNG
IRVHIFNAVPKEKRDILKLLAGRWNLSVFWAGWEPRRFLIVQATQKSRAPARNLLLNGPL
QTTGQVQPPIFNSLVDMDPRLVFALFDLPRETDVSVSSLILRFGGECELVWLNDKNALAI
FTDRTRAATAMRRVAHATAYQGAVNQRSTPIG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgggtgctagcacagaggatgtaaaaataaccaataacagtggtaggcaaaat
tcgtatggagacaatgggcgcagggcatggattcctagaggtagaggaaaccataatcaa
aaccctaaccctaacaccaatgggcgcagggtttggactcctagaggtagaggtagagca
tccaagtgtggacataattcatcatctcaggatttaatgctccccatgaatgacagaaag
catccttcacaatctgtacaccataagagatcagaaatggaggatcttggacttatgaac
aggagtagtagccaggattggaggtatcacgctccatcgtcagaagttaatgctcggcca
cttttgaagcaggaaagtgaggaggttattcatttggagagatcaaacgtgccaaatctt
gtgcaggagattgaacggaagcttcaacaaagcaaggtggaatgcatgatttgctatgag
atggtgggaaaatcagcggcaatatggtcttgtaatagctgctatgcactctttcaccta
cattgcataaggaagtgggcacgagctccgacttccagagatttgtctgctgggcaaagt
cagagatctaattggagatgcccaggttgtcaatcagtgcagtattcaagaccagaggat
cttcagtattattgtttctgcggaaaaatgcaaaacccatacaatgatttctatctgact
ccacactcatgtggagagccatgtggaaaatcacttgataaagggaaggaactgtctcgt
tgccctcatacttgcacactcctatgtcatccaggcccttgtcctccttgcacagcaatg
gctgcacctcagccatgcccatgcggtaaaaaaacaactacaagaagatgttccgatcag
aaaccagctgaaacatgtggacaagtgtgcgagcagcttcttacctgtggtcgacatctt
tgtgataaaatatgccatgagggtccttgtggttcatgcactattttaacaaatgcttca
tgcttttgtgggaaaaaagagaacatgatgctttgcggggacctggagttccatggagaa
ttagagtggaaaagtggtgtatatgcatgtgagaatctttgtatgaagatgctctcgtgt
caaaatcacaattgcagcttgggatgtcatccaggagaatgcaaagaatgtgatttatta
cctgagaagttaaaaacatgcccctgtggtaaaacgcaaatactaaatcaaaggaagagt
tgcctggatcctgtgccaacatgctcagaagtatgtgaaaagcttcttccttgtgggaaa
cacaagtgcataaattcttgtcaccagggcatctgccctccttgtctggtttctgtggat
cagaaatgtcgatgtggatcttcttccagaaaagtcagttgttggaaaacaacatcagtc
acaaaggacaacaaagaatttttgtgtgaaaaggtttgtggacagaagaaaaactgtggt
agacacagatgcaatgaaaaatgctgctctctgtcacatcgaggtcggtctgctattcaa
acaggtgactgggatccacatttatgtcttatgccatgtgggaaaaagatgagatgtggt
caacattactgccaggaactttgccatagtggctactgccccccatgtcttgaaactaat
tttactgatctctcttgtgcatgtgggaagacatcaattcctcctccagtaccatgtgga
acacctattccttcatgtgcatatccttgctccattcctcagccatgtggacattctgca
actcataattgccatcttggagagtgccctccttgcacagcgagtgctgcaaaaaaatgt
gtaggaagtcatgtaatccttagaaatgttctatgtggttcacgagaaataaaatgcaat
aagctttgtgggaaaacaaggcaatgtggaatgcatgcttgtactaggacatgccatata
ccaccctgtgacccagtttccatggaaagttcatcatctaaagccagaatctcatgtggg
caaacttgtggagctagtcgtagagattgcaaacatacgtgtatttctctgtgtcaccca
cctaggccttgccctgataccagatgcacatttccagtgactattacttgctcatgtggt
cgaatgacagcaaaagttccatgtgatgccggaggtaacaatatcagagctgatccagtc
tttgaagcttctatttatcacaaattgcctgctccccttcagccaacagagtcacatttg
accagagttccaatgggccagagaaagcttgcatgtgatgatgaatgtgcaaagttggag
aggaagaagactctagcaaatgccttcgacatttcaacaacagttgatctacaagaggtg
aatggaaaaacatcagaaatgcttgctgacttgattcggagagagcctcaatgggtctca
gatgttgaagataggtttaaatatttagttctgggaaggacaaaaataaacacaaacggt
attcgtgtccacattttcaatgctgtgccaaaggagaaaagggacatattgaagctactt
gcaggaaggtggaatctttctgtattttgggctggatgggaaccaagacgctttttaatt
gtacaggccacacaaaagtcaagagccccagcacgcaacctgttacttaatggtccattg
caaaccacagggcaggtgcaacctcccatttttaattcattggtagacatggatccgagg
cttgtatttgccttatttgatttaccaagagaaacagatgtcagtgtaagctccctaatt
ctgagattcggtggggagtgtgaacttgtttggctgaatgacaagaatgcattagccata
tttacagacaggacaagggctgcaacggctatgagacgtgtggcgcatgcaactgcatat
cagggtgctgtcaatcaaaggagcacaccaataggttag
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