Cryptomeria japonica (Japanese cedar): 131050640
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Entry
131050640 CDS
T10556
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjf03000
]
131050640
04121 Ubiquitin system [BR:
cjf04121
]
131050640
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
131050640
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
131050640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
131050640
NCBI-ProteinID:
XP_057840828
LinkDB
All DBs
Position
8:complement(171889601..171891976)
Genome browser
AA seq
740 aa
AA seq
DB search
MICYEMVGKSAAIWSCNSCYALFHLHCIRKWARAPTSRDLSAGQSQRSNWRCPGCQSVQY
SRPEDLQYYCFCGKMQNPYNDFYLTPHSCGEPCGKSLDKGKEMSRCPHTCTLLCHPGPCP
PCTAMAAPQPCPCGKKTTTRRCSDQKPAESCGQVCEQLLTCGRHLCDKICHEGPCGSCTI
LTNASCFCGKKENMMLCGDLEFHGELEWKSGVYACENLCMKMLSCQNHNCSLGCHPGECK
ECDLLPEKLKTCPCGKTQILNERKSCLDPVPTCSEVCEKLLSCGKHKCIYSCHQGICPPC
LVSVDQKCRCGSSSRKVSCWKTTSETEDNKEFLCEKVCGQKKHCGRHRCNEKCCPLSHRG
RSDIQTGDWDPHLCLMPCGKKMRCGQHYCQELCHSGYCPPCLETNFTDLSCACGKTSIPP
AVPCGTPIPSCAYPCSIPQPCGHSATHNCHLGECPPCTASAEITCSCGRMTAKVPCDAGG
NNIRADPVFEASIYHKLPARLQPTESHLTRVPMGQRKLACDDECAKLERKKTVANAFDIS
TSVDLQEVNGKTSEMLADLIRREPQWVSDVEDRFKYLVLGRTKINTNGIRVHIFNAVPKE
KRDILKLLAGRWNLSVFWAGWEPRRFFIVQGTQKSRAPARNLLLNGPLQTTGQVQPPIFN
SLVDMDPRLVFALFDLPRETDVSVSSLILRFGGECELVWLNDKNALAIFTDMTRAATAMR
RVAHATAYQGAVNQTSTPIG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgatttgctatgagatggtgggaaaatcagcggcaatatggtcttgtaatagctgctat
gcactctttcacctacattgcataaggaagtgggcacgagctccaacttccagagatttg
tctgctgggcaaagtcagagatcgaattggagatgcccaggttgtcaatcagtgcagtat
tcaagaccagaggatcttcagtattattgtttctgcggaaaaatgcaaaacccatacaat
gatttctatctgactccacactcatgtggagagccatgtggaaaatcacttgataaaggg
aaggaaatgtctcgttgccctcatacttgcacactcctatgtcatccaggcccttgtcct
ccttgcacagcaatggctgcacctcagccatgcccatgcggtaaaaaaacaactacaaga
agatgttccgatcagaaaccagctgaatcatgtggacaagtgtgcgagcagcttcttacc
tgtggtcgacatctttgtgataaaatatgccatgagggtccttgtggttcatgcactatt
ttaacaaatgcctcatgcttttgtgggaaaaaagagaacatgatgctttgcggggacctg
gagttccatggagaattagagtggaaaagtggtgtgtatgcatgtgagaatctttgtatg
aagatgctctcgtgtcaaaatcacaattgcagcttgggatgtcatccaggagaatgcaaa
gaatgtgatttattacctgagaagttaaaaacatgcccctgtggtaaaacacaaatacta
aatgaaaggaagagttgcctggatcctgtgccaacatgctcagaagtatgtgaaaagctt
ctttcttgtgggaaacacaagtgcatatattcttgtcaccagggcatctgccctccttgt
ctggtttctgtggatcagaaatgtcgatgtggatcttcttccagaaaagtcagttgttgg
aaaacaacatcagaaacagaggacaacaaagaatttttgtgtgaaaaggtttgtggacag
aagaaacactgtggtagacacagatgcaatgaaaaatgctgccctctgtcacatcgaggt
cggtctgatattcaaacaggtgactgggatccacatttatgtcttatgccatgtgggaaa
aagatgagatgtggtcaacattactgccaggaactttgccatagtggctactgcccccca
tgtcttgaaactaattttactgatctctcttgtgcatgtgggaagacatcgattcctcct
gcagtaccatgtggaacacctattccttcatgtgcatatccttgttccattcctcagcca
tgtggacattctgcaactcataattgccatcttggagagtgccctccttgtacagcgagt
gctgaaattacttgctcatgtggtcgaatgacagcaaaagttccatgtgatgccggaggt
aacaatatcagagctgatccagtctttgaagcttctatttatcacaaattgcctgctcgc
cttcagccaacagagtcacatttgaccagagttccaatgggccagagaaagcttgcatgt
gatgatgaatgtgcaaagttggagaggaagaagactgtagcaaatgccttcgacatttca
acgagtgtcgatctacaagaggtgaatggaaaaacatcagaaatgcttgctgacttgatt
cggagagagcctcaatgggtctcagatgttgaagataggtttaaatatttagttctggga
aggacaaaaataaacacaaacggtattcgtgtccacattttcaatgctgtgccaaaggag
aaaagggacatattgaagctacttgcaggaaggtggaatctttctgtattttgggctgga
tgggaaccaagacgcttttttattgtacagggcacacaaaagtcaagagccccagcacgc
aacctgttacttaatggtccattgcaaaccacagggcaggtgcaacctcccatttttaat
tcattggtagacatggatccgaggcttgtatttgccttatttgatttaccaagagaaaca
gatgtcagtgtaagctccctgattctgagattcggtggggagtgtgaacttgtttggctg
aatgacaagaatgcattagccatatttacagacatgacaagggctgcaacggctatgaga
cgtgtggcccatgcaactgcatatcagggtgctgtcaatcaaacgagcacaccaataggt
tag
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