Cryptomeria japonica (Japanese cedar): 131050654
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Entry
131050654 CDS
T10556
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjf03000
]
131050654
04121 Ubiquitin system [BR:
cjf04121
]
131050654
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
131050654
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
131050654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
131050654
NCBI-ProteinID:
XP_057840844
LinkDB
All DBs
Position
8:complement(171657400..171660851)
Genome browser
AA seq
992 aa
AA seq
DB search
MEMGASTEDVKITNNSGRQNSYGNNGRRAWIPRGRGNHNQNPNPNTNGRRVWTPRGRGRA
SKCGHNSSAHDLVLPMNDRKHPSQSVHHKRSEMEDLGLMNRSNSQDWRYHAPSSEVNARP
LLKQESEEVIHLERSNVPNLVQEIERKLQQSKVECMICYEMVGKSAAIWSCNSCYALFHL
HCIRKWARAPTSRDLSAGQSQRSNWRCPGCQSVQYSRPEDLQYYCFCGKMQNPYNDFYLT
PHSCGEPCGKSLDKGKEMSRCPHTCTLLCHPGPCPPCTAMAAPQPCPCGKKTITRRCSDQ
KSAESCGQVCEQLLTCGRHLCDKICHEGPCGSCTILINASCFCGKKENMMLCGDLEFHGE
LEWKNGVYACENLCMKMLSCQKHNCSLGCHPGECKECDLLPEKLKTCPCGKTQILNQRKS
CLDPVPTCSEVCEKLLPCGKHKCINSCHQGICPPCLVSVDHKCRCGSSSRKVSCWKTTSV
TEDNKEFLCEKVCGQKKNCGRHRCNEKCCPLSHRGRSDIQTGDWDPHLCLMPCGKKMRCG
QHYCQELCHSGYCPPCLETNFTDLSCACGKTSIPPPVPCGTPIPSCAYPCSIPQPCGHSA
THNCHLGECPPCTASAAKKCVGSHVILRNVLCGSREIRCNKLCGKTRQCGMHACTRTCHI
PPCDTVSMESSSSKARISCGQTCGATRRDCKHTCISLCHPSRPCPDTRCTFPVTITCSCG
RMTAKVPCHAGGNNIRADPVFEASIYHKLPAPLQPTESHLTRVPMGQRKLACDDECAKLE
RKKTLANAFDISTTVDVQEVNGKTSEMLADLIRREPQWVSDVEDRFKYLVLGRTKINTNG
IRVHIFNAVPKEKRDILKLLAGRWNLSVFWAGWEPRRFLIVQVTQKSRAPARNLLLNGPL
QTTGQVQPPIFNSLVDMDPRLVFALFGLPRETDVSVSSLILRFGGECELVWLNDKNALAI
FTDMTRAATAMRRVAHATAYQGAVNQTSTPIG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgggtgctagcacagaggatgtaaaaataaccaataacagtggtaggcaaaat
tcgtatggaaacaatgggcgcagggcatggattcctagaggtagaggaaaccataatcaa
aaccctaaccctaacaccaatgggcgcagggtttggactcctagaggtagaggtagagca
tccaagtgtggacataattcatcagctcatgatttagtgctccccatgaatgacagaaag
catccttcacaatctgtacaccataagagatcagaaatggaggatcttggacttatgaac
aggagtaatagccaggattggaggtatcacgctccatcgtcagaggttaatgctcggcca
cttttgaagcaggaaagtgaggaggttattcatttggagagatcaaacgtgccaaatctt
gtgcaggagattgaacggaagcttcaacaaagcaaggtggaatgcatgatttgctatgag
atggtgggaaaatcagcggcaatatggtcttgtaatagctgctatgcactctttcaccta
cattgcataaggaagtgggcacgagctccaacttccagagatttgtctgctgggcaaagt
cagagatcgaattggagatgcccaggttgtcaatcagtgcagtattcaagaccagaggat
cttcagtattattgtttctgcggaaaaatgcaaaacccatacaatgatttctatctgact
ccacactcatgtggagagccatgtggaaaatcacttgataaagggaaggaaatgtctcgt
tgccctcatacttgcacactcctatgtcatccaggcccttgtcctccttgcacagcaatg
gctgcacctcagccatgcccatgtggtaaaaaaacaattacaagaagatgttccgatcag
aaatcagctgaatcatgtggacaagtgtgcgagcagcttcttacctgtggtcgacatctt
tgtgataaaatatgccatgagggtccttgtggttcatgcactattttaataaatgcctca
tgcttttgtgggaaaaaagagaacatgatgctttgcggggacctggagttccatggagaa
ttagagtggaaaaatggtgtgtatgcatgtgagaatctttgtatgaagatgctctcgtgt
caaaagcacaattgcagcttgggatgtcatccaggagaatgcaaagaatgtgatttatta
cctgagaagttaaaaacgtgcccctgtggtaaaacacaaatactaaatcaaaggaagagt
tgcctggatcctgtgccaacatgctcagaagtatgtgaaaagcttcttccttgtgggaaa
cacaagtgcataaattcttgtcaccagggcatctgccctccttgtctggtttctgtggat
cacaaatgtcgatgtggatcttcttccagaaaagtcagttgttggaaaacaacatcagtc
acagaggacaacaaagaatttttgtgtgaaaaggtttgtggacagaagaaaaactgtggt
agacacagatgcaatgaaaaatgctgccctctgtcacatcgaggtcggtctgatattcaa
acaggtgactgggatccacatttatgtcttatgccatgtgggaaaaagatgagatgtggt
caacattactgccaggaactttgccatagtggctactgccccccatgtcttgaaactaat
tttactgatctctcttgtgcatgtgggaagacatcaattcctcctccagtaccatgtgga
acacctattccttcatgtgcatatccttgctccattcctcagccatgtggacattctgca
actcataattgccatcttggagagtgccctccttgcacagcgagtgctgcaaaaaaatgt
gtaggaagtcatgtaatccttagaaatgttctatgtggttcacgagaaataagatgcaat
aagctttgtgggaaaacaaggcaatgtggaatgcatgcttgtactaggacatgccatata
ccaccctgtgacacagtttccatggaaagttcatcatctaaagccagaatctcatgtggg
caaacttgtggagctactcgtagagattgcaaacatacgtgtatttctctgtgtcacccg
tctaggccttgccctgataccagatgcacatttccagtgactattacttgctcatgtggt
cgaatgacagcaaaagttccatgtcatgccggaggtaacaatatcagagctgatccagtc
tttgaagcttctatttatcacaaattgcctgctccccttcagccaacagagtcacatttg
accagagttccaatgggccagagaaagcttgcatgtgatgatgaatgtgcaaagttggag
aggaagaagactctagcaaatgccttcgacatttcaacaacagttgatgtacaagaggtg
aatggaaaaacatcagaaatgcttgctgacttgattcggagagagcctcaatgggtctca
gatgttgaagataggtttaaatatttagttctgggaaggacaaaaataaacacaaacggt
attcgtgtccacatttttaatgctgtgccaaaggagaaaagggacatattgaagctactt
gcaggaaggtggaatctttctgtattttgggctggatgggaaccaagacgctttttaatt
gtacaggtcacacaaaagtcaagagccccagcacgcaacctgttacttaatggtccattg
caaaccacagggcaggtgcaacctcccatttttaattcattggtagacatggatccgagg
cttgtatttgccttatttggtttaccaagagaaacagatgtcagtgtaagctccctgatt
ctgagattcggtggggagtgtgaacttgtttggctgaatgacaagaatgcattagccata
tttacagacatgacaagggctgcaacggctatgagacgtgtggcccatgcaactgcatat
cagggtgctgtcaatcaaacgagcacaccaataggttag
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