Cryptomeria japonica (Japanese cedar): 131050728
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Entry
131050728 CDS
T10556
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131050728
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
131050728
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
131050728
NCBI-ProteinID:
XP_057840954
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Position
10:complement(914236221..914238615)
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AA seq
408 aa
AA seq
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MTLYMFMFMFILVVFSSNMPGVCSVRLLGSLNHNTHNIFNVLKYGAKADGQTDDSTAFLA
AWNAACSSTGSPVVYVPKMTFLINPAIFQGPCHSNKITMQVAGKLIASTDNSLWSEKSIN
YWLHFMNVIGLTIEGSGILDGRGASWWTEVNGKKTNQIGPTTLRFTGTMNTIVRKITSVN
SKQFHINFDTCNYVEVEGVTINAPGDSPNTDGIHLGQSSNVQIRNIIVGTGDDCISIGPG
SFNVNIEGVICGPGHGISIGSLGEDNALAAVKNITVSGVSFHDTQNGVRIKTWQGGNGFA
TDITFQNVKMDNVQNPVIIDQYYSPYGSPTKGDSNVKISNVLYQNITGTSASNAAIAFEC
SQSVPCEGIKVDHINLSCNDGKTNAQFLCRNAHVTAVDAGAVSPTPCL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgtatatgttcatgttcatgtttattcttgttgtgttctcatccaatatgccc
ggtgtatgttctgtcagactcttgggcagcctgaaccataatacacataatatatttaat
gttcttaagtacggtgcaaaagctgacggacaaacagatgatagcacggcctttctagca
gcttggaatgctgcctgttcttcaactgggtcaccagttgtatatgtcccaaagatgacg
tttctgatcaatccagctatctttcaagggccatgtcatagtaacaagattacaatgcag
gtagctgggaagcttattgcttcaacagataatagcttgtggagtgaaaagagcataaat
tattggctgcatttcatgaatgtgattggcttaacaattgaaggtagcggaattttagat
ggacgaggagcttcttggtggacagaggtgaatggaaagaagacaaatcagattggaccc
acgacattgagatttacaggcaccatgaataccatagttagaaagatcacttcagtcaac
agcaaacagtttcatataaacttcgatacctgcaattatgttgaggttgaaggtgtgact
attaacgctccgggtgacagtcctaatactgatggaattcatttgggacagtcttccaat
gttcaaattagaaacatcattgtaggaacaggagacgactgtatttctattggaccagga
tccttcaatgtcaacattgaaggggttatatgtgggccaggacatggaatcagtattgga
agtcttggtgaagataacgcccttgctgctgtaaagaacataacagtaagtggagtttct
tttcatgacacacagaatggagtaaggatcaaaacttggcaaggagggaatggttttgca
actgatataacatttcaaaatgtaaaaatggataacgtacaaaaccctgttataattgac
caatattattctccatatggaagtcctacaaagggtgattctaatgtgaagatcagtaat
gtcctataccagaacataactggaacatcggcttcaaatgctgcaattgcttttgaatgc
agccaaagtgtgccttgtgaaggaatcaaagtagaccatataaacttgagctgtaacgat
ggaaaaacaaatgctcaatttttgtgtaggaatgcacacgtgactgcagttgatgctggg
gctgtaagcccaactccctgcctctaa
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