Cryptomeria japonica (Japanese cedar): 131050836
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Entry
131050836 CDS
T10556
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjf01009
]
131050836
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjf03021
]
131050836
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
131050836
Protein phosphatases and associated proteins [BR:
cjf01009
]
HAD phosphatases
Fcp/Scp phosphatases
131050836
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
131050836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
131050836
NCBI-ProteinID:
XP_059072718
LinkDB
All DBs
Position
2:complement(573453902..573474794)
Genome browser
AA seq
968 aa
AA seq
DB search
MAIESFNSILYHGDTRLGEVNVWPQYEDLNLLDSVKEVIKISHLSPGSERCTPLAVLHTI
AAYGVFIKIEVKEPQPQFDQSPLKQLYATCLREAKTAIVPIGGRELHLVAMLSKTRRDQL
PCFWGYHVPSAMYNSCLGMLNLRCLAIVFDLDETLIVANTLRSFEDRIDALQRKIAVEMD
PQRAYGMMSELKRYQEDKAILKQYADTDQVFDNGKLVKAESELVPPQSDKGHPIVRPLIR
LQDKNMILTRINPNVRDTSVLVRLRPAWDELRTYLTFKGRKRFEVYICTMSERDYALEMW
RLLDGEARLINPAELLDRVLCVKPGLRKSLINVFHDGICHPKMAMVIDDRLKVWEDKDQP
RVHVVPAFAPYYAPQAEATSAVPVLCVARNVACNVRGGFFKDFDDGLLQKITEVFYEADT
KGLPAAPDVSNYLMSDDDTNLNRDLPLPEGMADSEVERRLNPQESNSPLQPEITSNGADH
QGFKTMARLPDQMQPVIAPPSIITVRPSRTDPPTEHFQEYSHGIPAVKPFVPQTLNTIES
NIQGSPIREEGEVPESELDPDTRRRLLILQHGQDTGKHNSVEPPLPVRPLQISVPPNQVP
GGWLGAEEEMSPRELTRPTQGLIVQSDSLSLEKQIQQPSFNHGVENSPAIDRCLGEPKRR
LPDEGFFGDDRVKNNHMIPDSFSHSEDEESSMNKVPTNCNSGGGNIFNASNAVGVLQEIA
MKCGTKVEFNSLLDKTMELQFTVEVLFSGEKVGAGIGRTKKEAQHRASEDALRYMANQYM
SQPVVVGAGLGRGQTDSGFHQWGEDEGLRESCSSIGFVGMPKEDDIAVASTSGQSKCVDQ
RVTEDMKKSYNAIDTLKEMCTMEGLSLTFKDPTALVLNRRESCAQVEVAGQILGKGSGPT
WEVAKLQATEEALRNFKSVFVQSTQKRLNSPRSLPVQPNKRIKSTEMSRGAPRIPPSPRR
YQKNGPPS
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggccatagagtcatttaactccatcctttaccatggagatacccgtttgggagaagtt
aacgtttggcctcagtatgaggatttgaacttgttggattcagtgaaggaggtgattaag
atatctcatctttcacctggaagcgagagatgtactcctttagctgtacttcacaccatt
gcagcttatggagtttttatcaaaatagaggtgaaggagccgcagcctcaatttgaccag
tcacctcttaaacaactttacgccacatgcttaagagaagcaaagactgctattgtacca
attggagggagggagctgcatttagtggccatgctgtcaaaaactaggcgtgatcagttg
ccttgtttttggggatatcatgtgccctctgcgatgtataattcgtgtcttgggatgcta
aacctaaggtgcttggcaatcgtttttgatttggatgaaacacttattgtggcaaataca
ttgcgatcttttgaggaccgcattgatgctctccagcgcaagattgcagttgagatggat
cctcagcgagcctatggaatgatgagtgagttaaagcgataccaggaagataaggcaatt
ttgaaacaatatgctgatactgatcaagtttttgataatgggaagctggtcaaagctgaa
tccgagttggtaccaccacaatcagacaaaggtcatcctattgttcgaccccttattaga
ttgcaggataaaaatatgatcttgacacgaattaatcctaatgttagagatactagtgtt
cttgttaggttacggccagcttgggatgaacttaggacctatttgacctttaaaggacga
aaacgctttgaagtttatatttgtactatgtcagaaagggattatgcattagagatgtgg
aggcttcttgatggtgaggcacgcttaatcaatcctgcagagcttcttgatcgtgttctt
tgtgtgaagccagggttaagaaagtccttgattaatgtctttcatgatggtatctgccat
cctaagatggcaatggttattgatgaccgactgaaagtttgggaggacaaagatcaacct
cgggttcatgttgttccagctttcgcaccatactatgctccacaggcagaggctacttca
gctgttccagtattgtgtgttgcaaggaatgttgcttgtaatgtacggggtgggtttttc
aaggactttgatgatggccttttgcaaaaaattaccgaagttttttatgaagctgataca
aagggtctgcctgctgcacctgatgtcagcaattatttgatgtcagatgatgatacaaac
ttgaatagagatctaccattgccagagggcatggctgattctgaggtagaaaggagactt
aatccacaagaatctaattctcctttgcaaccagagattacatctaatggggcagaccat
cagggttttaaaacgatggctcgtcttcctgatcaaatgcaacctgttattgcacctccg
tctattataactgtacggccatctcgtacagatcccccaactgaacattttcaagaatat
tcccatgggattccagcagttaaaccgtttgtacctcaaacccttaatactatagaatct
aatattcagggttctccaattagagaagaaggtgaagtcccagaatctgaactggatcca
gatacaagaaggcggcttttgatactgcagcatggccaagatactgggaaacataattca
gttgagcctcctttacctgttagaccgttgcaaatttcagtacctccaaatcaagtgcct
ggtggatggcttggagcagaagaagagatgagtcccagggaacttacaaggccaactcaa
ggactaatcgttcagtctgattctctttctttagaaaaacaaattcaacagccttctttt
aatcatggtgtggagaattctcctgcaattgataggtgtctaggtgagcctaaaaggcga
cttcctgatgagggattttttggagatgacagagtgaaaaataatcatatgattccagat
tcattttcccattcagaagatgaagaatcttccatgaacaaagtgccaactaattgcaat
tcaggaggaggtaacatattcaatgcttcgaatgctgtgggagttttacaagaaattgca
atgaaatgtggaacaaaggtggaatttaattcacttttggataaaacaatggagctccaa
tttactgttgaggtcttgtttagtggagaaaaagtgggagcaggtataggtagaaccaag
aaggaagcacaacatcgagcatctgaagatgctctcagatatatggccaatcaatatatg
tcacaacctgtagtggttggagctgggcttggacgtgggcagacagattctggttttcac
caatggggtgaggatgagggcttaagagaatcttgcagctctatagggtttgttggtatg
cctaaagaagatgacattgctgtagcaagtacatcagggcagtcaaaatgtgtggatcag
agagttactgaagacatgaaaaaatcgtataatgctattgacacccttaaagaaatgtgc
actatggaaggtcttagtcttacttttaaagatccgacagctttggttttaaacaggagg
gagtcatgtgcacaagttgaagtggctggacagatcctagggaagggtagtggtccaact
tgggaggtggctaagttgcaggctacagaggaggctcttcgtaattttaaatctgtgttt
gtccaatccacacaaaagcgtttaaactctcctaggtcactgccagttcaacccaacaaa
agaattaaatctacagaaatgtcacggggtgcaccacgtattccaccttctcctcgaaga
taccaaaaaaatggaccaccttcctaa
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