Cryptomeria japonica (Japanese cedar): 131051264
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Entry
131051264 CDS
T10556
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131051264
Membrane trafficking [BR:
cjf04131
]
Autophagy
Other autophagy associated proteins
Others
131051264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
131051264
NCBI-ProteinID:
XP_057841681
LinkDB
All DBs
Position
9:569204402..569216502
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AA seq
407 aa
AA seq
DB search
MAVVSKNTNRVHASSQPPKPMTTETKGSSRKVLFVGFNQDYGCVACGTDGGFRVYSCEPF
KETFRREFSNGGGIGIVEMLFRCNILAIVGGGSFPRYPSNKVMIWDDHQGRCIGELSFRA
QVRAVRLRRDKIAVALEHKIYVYNLADLTLVLQIDTMPNAKGLLAISTSSPNTVLACPGL
HRGQVRLEHLPLGVRKALFISAHDSHLACLALSPDGLRLATSSNKGTLVRIFNTLDGTRL
QELRRGADRAQIYSLAFSSNAQWLALSSDKGTVHVFGLRAFMPQDNNVDVASLASNQSPK
DDVGDGNNSGVSDADSAAILASNPSSSLSFMKGVLPSYFSSEWSFAQFHLPEEMQAIVAF
GAQRNTVLIVGTDGSFYKCGFDPMHGGEMIQQEFTKFVRPYEDEPNL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtaagtaagaacactaacagggttcacgcatcttctcaacctccaaagcca
atgacgacggaaacaaagggcagcagccgaaaagtgttgtttgtgggattcaatcaggat
tacgggtgcgtggcttgcggcacagatggaggattccgagtctacagctgtgagcccttc
aaggagacctttcggcgggagttcagcaatgggggcggcataggaatcgttgagatgctc
ttccgctgcaacatcttggccatcgtgggcgggggttcgttcccgcgctacccgtcgaac
aaggtaatgatatgggacgaccaccaggggcgctgcatcggcgagctctcctttagggcg
caggttagggccgtgcgtctccgtcgcgacaagatcgcggtggctcttgagcacaagatt
tatgtctacaacttggccgatttgacgctcgttcttcaaatcgatacgatgcccaacgca
aagggcctcctcgctatctccacttcctcccccaatactgtgctcgcttgcccgggcctc
caccgcgggcaggtgcgcctcgaacacttgcctcttggggttcggaaggcactgttcatt
tctgcccatgactcccacctcgcctgcctcgctctttcccctgacgggctccgcttggcc
acttccagcaacaagggtactctcgtcaggatttttaacactctggatggcacccgtttg
caagagttgagacggggagcagatagagcgcaaatatatagtctggcattttcttctaat
gctcagtggcttgcactttcaagtgacaaagggacagtacatgtgtttgggctccgagca
tttatgccccaagacaacaatgtagatgttgctagtttggcatctaaccaatccccaaag
gatgatgttggtgatggcaataacagtggtgtgtcagatgcagattctgctgctattctt
gcatctaaccccagttcaagtctctcttttatgaaaggtgttcttcccagttacttcagt
tcggaatggtcatttgctcaattccacttgccagaggaaatgcaggcaattgttgcattt
ggggctcagaggaatactgtcttaattgtaggtacagatggaagcttttacaaatgtggt
tttgatcccatgcatgggggggagatgatccaacaagaattcacaaagtttgttagacct
tacgaagatgagcctaacttatag
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