Cryptomeria japonica (Japanese cedar): 131051489
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Entry
131051489 CDS
T10556
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131051489
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131051489
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131051489
NCBI-ProteinID:
XP_057842029
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Position
10:206980259..206982458
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AA seq
404 aa
AA seq
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MENTAGLKMWLALITIFIVGFVISASAVIDHGHGVGADIFLRNETISFVGSLLVRNGPMP
WVGTTGRLCRGSDGTKCQFSNCGLGHLLPKCAIGFARGIKGGRKGLSYTVTSSDDNPNNP
APGTLRYAVSLYSASPRGVWITFSHDMTIQLKEMLHVFNHTTIDGRGVRVIITGSSIGLS
KVEDIIIHNIQINNTDFGTVHIFESKKVWVDHITSFDGEVGLVSAVEGSTDITISNSRLF
NNHYNMLLGADDSDIIDKKMRVTIYRNWFKDTNQRNPHCRWGYCHVVNNLYANWGSYAIG
ARVHAQIYSEKNVFVPGKDPEVTEWYPGYESKWDTTPRIQSNGDLLLYGATFHQFLYNGP
VVAPPYKNRRQYPPVISTGRLPRLIGYCSGVLLKGSVRSCLLRG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacggccggtttgaaaatgtggttagcattgataactatctttattgttgga
tttgtcatttctgcttcagcagtgattgatcatggtcatggagttggtgctgacatattt
ctgaggaatgaaactatttcatttgtgggatcattactagtgagaaatggtccaatgccc
tgggtaggaactacagggcgattgtgtagaggatctgatggtactaaatgccagttctcc
aactgtgggctagggcatcttctcccaaagtgtgccattggatttgcaagaggcattaaa
ggtgggcgcaaagggctttcatatacagtcaccagttctgatgacaaccctaacaatcct
gctccaggtacattgcgttatgctgtaagcctctattctgccagccctagaggagtatgg
atcacattttcccatgatatgacaattcagctgaaagaaatgctccatgtctttaatcac
acaaccatagatggaaggggagtgagggtgattatcactggatcttcaattgggctgagt
aaagttgaggacattattattcataacattcaaatcaacaataccgatttcggcacagtt
catatattcgaatccaaaaaggtctgggtggatcacattacttcctttgatggtgaggtg
ggtctcgtatcggcagttgagggctctactgatattaccatttcaaactctcgtttattt
aataatcactacaatatgttattgggtgccgatgattcagacataattgacaagaaaatg
agagttactatttataggaattggttcaaagatacaaaccagcgcaatcctcactgcaga
tggggatactgtcatgttgttaacaatctgtatgcaaactggggatcatatgcaattggg
gcaagagttcatgcacaaatttactcggaaaagaatgtatttgtacctggaaaagaccct
gaagtaactgaatggtacccagggtatgaatctaagtgggacaccactcctaggatccag
tccaatggtgatctacttctatatggtgctacatttcatcaattcctgtacaatggacct
gtggttgctcctccttacaaaaaccgcaggcagtatcctcctgtcattagcacaggaaga
ctaccacgtcttattggttactgctctggagttcttctgaaaggaagtgttcgttcttgc
cttctgcgtggataa
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