Cryptomeria japonica (Japanese cedar): 131052064
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Entry
131052064 CDS
T10556
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131052064
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131052064
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131052064
NCBI-ProteinID:
XP_057842626
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Position
3:complement(758655321..758657375)
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AA seq
415 aa
AA seq
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MASRQALQPLFLLLAVFFIKLVMVESIRTPFNMTKAENSDKYHVEKPELVVQMVERSLNN
SKRKLSSCETGNPIDDCWRCDPNWVNNRKRLADCAIGFGKNAIGGKNGRFYIVTDPKNDD
PVNPRPGTLRHAVIQTEPLWIIFQRDMVIQLKEELIMNSYKTIDGRGANVHIANGACITI
QYVTNIIIHGVHIHDCKPAGNTNVRSSPTHYGFRTKSDGDGISIFGSSAIWVDHCSLSSC
ADGLIDAIRGSTAITISNNFFTHHDKVMLLGHSDAYTEDVKMQVTVTFNHFGEGLVQRMP
RCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPDNRFHKEVTKHQDSTKGNWR
SVGDLMLNGAFFTASGAKASSSYAKASSMVASPSSIVGSITASSGVLTCRKGSSC
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagacaagccttacagccattgtttcttcttcttgctgtctttttcatcaag
ttagtaatggtggaatcaataagaacccccttcaatatgactaaggctgagaatagtgat
aaatatcatgttgagaagccggagcttgtagttcaaatggtagaaaggagtttaaataat
tcgaaaagaaagctgagctcgtgcgaaacggggaaccccatcgatgactgttggcgttgt
gatcctaactgggttaacaaccgaaagagactggctgattgtgccatcggatttggcaaa
aacgccattggaggtaagaatggcagattttatatagttacagatccaaaaaacgatgac
ccggtcaatcctcgacctggcactctgcggcacgctgttattcaaaccgaacctctctgg
attattttccaaagagatatggttattcagctcaaggaggagcttatcatgaacagttat
aagactattgatggtagaggtgccaatgttcatatagcaaatggagcttgcattacaatt
cagtatgtgaccaatattatcattcatggagttcatatccatgactgtaaacctgcggga
aatacaaatgttaggagctccccgacccattatgggtttagaaccaagagtgatggagat
gggatttccatctttggatcaagcgcaatttgggttgaccactgttcattgtcaagttgc
gcagatggattgatcgacgccatcaggggttccactgctataaccatttcaaacaacttt
ttcactcaccatgacaaggtgatgctcctgggacacagcgatgcctacaccgaggacgtc
aaaatgcaagtaacagttactttcaaccactttggagaagggcttgttcaacgtatgccc
agatgtcgacatggatactttcatgtggtgaacaatgattacacccactgggaaatgtat
gcaatcgggggaagtgcaaaccccaccattaatagccaaggcaatagattccttgctcct
gataatcgattccacaaggaggttacaaagcaccaagattcaacaaaaggcaactggaga
tcagtgggagatcttatgttaaatggagcattcttcacagcatcaggggctaaagcatcc
tcaagctatgccaaagcttcaagtatggtggcaagtccttcctctattgtgggctctatc
actgcaagttcgggtgttctcacctgcagaaaaggttccagttgttag
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