Cryptomeria japonica (Japanese cedar): 131052427
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Entry
131052427 CDS
T10556
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjf03032
]
131052427
03029 Mitochondrial biogenesis [BR:
cjf03029
]
131052427
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
131052427
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
131052427
Mitochondrial biogenesis [BR:
cjf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
131052427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
AAA_22
Pif1_2B_dom
AAA_5
DEAD
PhoH
AAA_16
ATPase_2
ResIII
AAA_14
Mg_chelatase
AAA_7
AAA_24
Viral_helicase1
AAA
NACHT
T2SSE
ATPase
AAA_25
NPHP3_N
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
131052427
NCBI-ProteinID:
XP_057843078
LinkDB
All DBs
Position
7:complement(142656553..142658010)
Genome browser
AA seq
485 aa
AA seq
DB search
MANSSESQTHRYNTRYRQRQQEQLAGTAQENLQNLRLTQQEEEENSIQLSEEQANVLSII
SEGRSVFFTGAAGTGKTFLLRRAITNLKRLHGNEFVFVTASTGMAAAALNGTTLHSFAGI
GCASESAEGLLSTLYKMRDAKLRWQTAKALVIDEINMIHGELFEKLNYIAKKLRKQPDLE
FGGLQLVVSGDFFQLCPVDVPNFHKFFAFQADCWDTCFEIQTELTEIYRQSDLEFKLMLN
EIRRGICSDQSVEMLRARQGLRNEEGLTYTKLYFLKVDAERENKHRLKEMEALGTEMFTF
HAQDEDNGSEPVKSQINKLIAVKKLKLCVEAEVMLIYNLDTKRGLVNGTKGRVLGFQHTN
ENPDISPGNVWPVVQFEGVNSPVHTVTPRSWDVFDENGNVIAGAKRIQVPLISAWALSAY
KCQGLTLERVETDLSTFCSYGLVYLVLSRLKTLEGLRLTGFHPSAVKVHPAVFEFYEKLG
RNGIE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattcatctgagtcccagactcaccggtacaatacacgctacagacaacgccaa
caggagcagcttgctggaacagcacaggagaatttgcagaatttgaggctcacacagcaa
gaagaagaagaaaattccattcagttgtctgaagagcaggcaaatgtattgagcatcatc
tcggaggggcgttctgtgtttttcacaggagccgctggaacaggcaaaactttcctgctt
cgccgcgccataacaaatctcaaacgtttgcacggaaatgaatttgtatttgtcacggct
tccaccggaatggcggccgccgctctcaacggaactactctgcactcgtttgccgggatc
ggatgtgcttcagaaagcgccgagggtttactctctactctgtataaaatgcgggatgca
aaattgcggtggcaaacagcaaaagctctggtaattgatgagataaatatgatacacgga
gagctttttgagaaattgaactacatagccaagaaattgaggaagcagccggacctggag
tttggcggtttacagctggtggtttcaggtgatttcttccaactttgtcccgtagatgta
ccgaatttccacaaatttttcgcctttcaggcggattgttgggatacatgcttcgagatc
cagaccgagctaacagagatttataggcagtcggatttagaattcaagctaatgctgaat
gaaatccgaagaggcatttgcagtgatcaaagcgttgagatgctcagagcgcggcaggga
ctgcgaaatgaagagggattaacctacacgaaattgtattttttaaaggttgatgcagag
agggaaaataaacatcggctgaaggaaatggaggcgctcggtacagaaatgtttacattt
catgctcaggatgaggataatggttctgagcctgttaaatctcagatcaacaagcttatt
gcagtgaagaagcttaagctctgcgttgaggccgaagtcatgcttatttataatctagac
acaaaaagagggctggtgaatggaacaaagggcagagttttagggtttcagcatacaaat
gaaaaccctgatattagccctggaaatgtctggcctgttgttcaatttgaaggcgttaat
tcgcctgtacacactgtgacgcctcgctcctgggatgtatttgatgaaaacggaaatgtt
atagcaggggctaaaagaatccaggtgccgctgatttcagcgtgggctttgagcgcgtac
aagtgccagggtttgacactggagagagtggaaacggatctttccactttttgttcctat
ggtctggtatatttggtgctttcaagattgaagactttggaggggcttcggctcacagga
ttccacccttccgctgttaaggtacaccctgcggtttttgaattctatgaaaagctcggc
aggaatggtatcgaatga
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