Cryptomeria japonica (Japanese cedar): 131052709
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Entry
131052709 CDS
T10556
Name
(RefSeq) pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131052709
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131052709
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131052709
NCBI-ProteinID:
XP_057843278
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Position
5:838249937..838252364
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AA seq
374 aa
AA seq
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MDSPCLVALLVFSFVIGSCFSDNPIDSCWRGDSNWAQNRMKLADCAVGFGSSTMGGKGGD
LYTVTNSDDDPVNPAPGTLRYGATRDRPLWIIFSGNMNIKLKMPMYIAGYKTFDGRGAQV
YIGNGGPCVFIKRVSNVIIHGLHLYGCSTSVLGNVLINESFGVEPVHPQDGDALTLRTAT
NIWIDHNSFSNSSDGLVDVTLTSTGVTISNNLFFNHHKVMLLGHDDAYSDDKSMKVTVAF
NQFGPNCGQRMPRARYGLVHVANNNYDPWTIYAIGGSSNPTILSEGNSFTAPNESYKKQV
TIRIGCKTSSSCSNWVWQSTQDVFYNGAYFVSSGKYEGGNIYTKKEAFNVENGNATPQLT
KNAGVLTCSLSKHC
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggattccccttgcttagtagcattactggttttctcttttgtaattggatcttgcttt
tctgataatcccatagatagctgctggagaggagactcaaactgggcacaaaacagaatg
aagctcgcagattgtgcagtgggcttcggaagctccaccatgggaggcaagggaggagat
ctttatacagtcacaaactcagatgacgatcctgtgaatcctgcaccaggaactctgcgc
tatggagcaacccgagataggcccctgtggataattttcagtgggaatatgaatataaag
ctcaaaatgcctatgtacattgctgggtataagacttttgatggcaggggagcacaagtt
tatattggcaatggcggtccctgtgtatttatcaagagagtgagcaatgttatcatacac
ggtttgcatctttacggctgtagtactagtgttttggggaatgttttgataaacgagagt
tttggggtggagcctgttcatcctcaggatggcgatgctcttactctgcgcactgctaca
aatatttggattgatcataattctttctccaattcttctgatggtctggtcgatgtcact
cttacttcgactggagttactatttccaataatctttttttcaaccatcataaagtgatg
ttgttagggcatgatgatgcatatagtgatgacaaatccatgaaggtgacagtggcgttc
aatcaatttggacctaactgtggacaaagaatgcctagggcacgatatggacttgtacat
gttgcaaacaataattatgacccatggactatatatgcaattggtgggagttcaaatcca
accattctaagtgaagggaatagtttcactgcaccaaatgagagctacaagaagcaagta
accatacgtattggatgcaaaacatcatcatcttgttcaaattgggtgtggcaatctaca
caagatgttttttataatggagcttattttgtatcatcagggaaatatgaagggggtaat
atatacacaaagaaagaagctttcaatgttgagaatgggaatgcaactcctcaattgaca
aaaaatgctggggttctaacatgctctctctctaaacattgttga
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