Cryptomeria japonica (Japanese cedar): 131052841
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Entry
131052841 CDS
T10556
Name
(RefSeq) ubiquitin C-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131052841
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjf01002
]
131052841
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131052841
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131052841
Peptidases and inhibitors [BR:
cjf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131052841
Ubiquitin system [BR:
cjf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131052841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
pP_pnuc_2
MerR
Motif
Other DBs
NCBI-GeneID:
131052841
NCBI-ProteinID:
XP_057843454
LinkDB
All DBs
Position
6:complement(493999653..494054979)
Genome browser
AA seq
1123 aa
AA seq
DB search
MTMMTPPPLDVYSSQQQEEEEMLVPHSEFSNEGAQPMEVVGQGDTVSTVENQPSEDPPSS
RFTWAIDNFSRLTVKKHYSDIFTVGGFKWRVLIFPKGNNVDQLSMYLDVADAATLPYGWS
RQAQFSLAVVNQITSKFSIRKDTQHQFNARESDWGFTSFMPLGEIYDPSKGYLVNDTLIV
EADVVVRKVDSCWQYDSKKETGFVGLKNQGATCYMNSLLQTLYHVPYFRKAVYHMPTTEN
DMPSGSIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLED
KMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVE
VERLEGDNKYHAEQHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL
QLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDER
VTKEDMKKALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDRDKIICNVDE
KDIAEHLRVRLKKEQEEKEQKRKEKAEAHLYTIIKVARDEDLSEQIGKDIFFDLVDHDKV
RSFRIQKQTLFTVFKEEVAKEFGIPVQFLRFWFWAKRQNHTYRPNRPLSVAEEAQIVCHL
REASNKANNAELKLFLEIERSADLHPLPLPEKTSADILLFFKLYDPEKEELRYVGRSFVK
ALGKPTEILTKLNELAGFPPNEEIDLFEEIKFEPNVMCEHIDKRLTFRGSQLEDGDIICY
QRVISKEDEERFRFPDVPSFLEYVHNRQIVHFRSLDKPKEDDFCLELSKLYTYDDVVDRV
AHKLGLDDPSKIRLTAHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPL
PELQGLKTLKVAFHHSTKDEVSVHTIRLPKQSTVGDVINDLKTKVELSNPDAEIRLLEVF
YHKIYKIFPLHEKIENINDQYWTLRAEEIPEEEKNLGPNNRLIHVYHFTKDASQNHMQVQ
NFGEPFFLLIHEGETLAEVKQRIQKKLQVSDDEFAKWKFAFLSLGRPDYLQDTDIVSSRF
QRRDVYGAWEQYLGLEHSDNAPKRSYQTNQNRHTFEKPVKIYN
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgatgacccctccgcctctggatgtatattcttctcagcaacaagaggaagaa
gaaatgctcgtaccgcattccgagttcagcaacgagggcgcccaacccatggaagttgta
gggcaaggcgacactgttagtaccgtggaaaatcaaccttctgaagatcctccttcatct
agatttacctgggcaatcgataatttttcaaggttaactgtgaagaaacattattctgac
atttttaccgttggaggatttaaatggcgggtgctaatttttccaaaaggaaacaatgta
gatcagctatctatgtatttagatgtggctgatgctgccacattaccgtatggttggagc
agacaagcacaatttagcctggctgttgtcaatcagattacctcgaaattttctatacga
aaagatacacaacatcagtttaatgctcgagagagtgactggggtttcacatcattcatg
ccccttggagaaatttatgatccttcaaaaggctatctggttaatgatactctaattgta
gaagcagatgttgttgttcgaaaagttgatagctgttggcagtatgattcaaagaaagaa
acagggtttgttggactcaagaatcaaggagctacatgctacatgaattcacttcttcag
acattgtatcatgtcccttacttcagaaaggccgtatatcacatgcctacaactgaaaat
gacatgccatctggtagcattccattggctttacagagtttattctataagcttcagtac
agtgatagcagtgttgcaacaaaggagttgacaaaatcttttggatgggatacatatgat
tctttcatgcaacatgatgttcaggagttgaatcgagtgctatctgagaaactagaagac
aaaatgaagggtactgttgtagagggtacaatacagcaactattcgagggtcatcatatg
aattacattgaatgcataaatgttgattacaagtcaacaaggaaagagtcattctatgat
ctgcagcttgatgtcaaagggtgccgagatgtgtatgcatcatttgataaatatgttgaa
gttgaacgccttgaaggggataataaataccatgctgaacaacatggtttacaggatgca
aagaagggtgttctgttcattgattttcctcctgtgctacaacttcagttaaagcgcttt
gaatatgatttcatgcgggatacaatggttaagataaatgatcgttatgagttcccttta
caacttgatcttgatagagaaaatgggaagtatctatctccagatgcagatagaagcgtg
cgcaatttgtacacacttcacagtgttttagtgcacagtggaggtgtgcatggtggtcat
tactatgcatatatcagacctacgctatcagaccagtggtttaagtttgatgatgagcgt
gtgacaaaggaggacatgaaaaaagctctagaggaacaatatggaggggaggaggagctg
cctcagacaaatccagggttcaacaacacaccatttaagttcacaaaatattccaatgct
tacatgcttgtctacattagagagagtgacagggataagatcatctgtaatgttgatgag
aaggatatagcagagcatctaagggttagattaaagaaagagcaagaggagaaggaacaa
aaaaggaaagagaaggctgaggctcacctttataccatcataaaggttgcacgtgatgaa
gacctttctgagcagattgggaaggatatattttttgaccttgtagatcatgacaaggtt
cgaagttttcgcattcagaagcaaacactatttacagttttcaaggaggaggtggcaaaa
gaatttggcattcctgtacagtttctgcgattctggttttgggccaaacgacagaaccat
acataccgtcccaataggcctttgtcagtagcagaggaggcccagattgtttgtcacttg
agagaggcttctaacaaggcaaataatgcagagttaaagctatttcttgaaatagaacga
agtgcagatcttcatccacttccccttccagaaaagacaagtgcggatatattactcttc
ttcaaactttatgaccctgagaaagaagagcttaggtatgttggcaggtcatttgtgaag
gccttaggaaagccaactgaaattttaacaaagttgaatgagttggctgggtttccacca
aatgaagaaattgacctttttgaggaaatcaagtttgagccgaatgttatgtgcgaacac
attgataagaggcttacattccgtggtagccaacttgaagatggagatattatatgttac
caaagggtcatttcaaaggaagatgaagaacgcttccggtttccagatgttccatctttt
ctagaatatgtgcacaaccggcagattgttcattttcgaagcttggataagccaaaggaa
gatgacttttgtcttgagttatcaaaactctacacttatgatgatgttgtagatagggtt
gcacataaacttggtctagatgatccttccaaaattagactcacagcgcacaattgttac
tctcagcaaccaaagccccaacctatcaagtatcgtggcgtggatcacttatctgatatg
ctggttcattacaatcagacatctgatatcttgtactatgaagttctggacataccactc
ccagagttgcaagggttaaagaccttaaaagtagcttttcatcattcaacaaaagatgaa
gtttctgttcacactataagattgccaaaacaaagtactgttggagatgtcattaatgac
ctcaagacaaaggtggagttatccaaccctgatgcggagattcgactgctggaggttttc
taccataaaatttacaagatttttccacttcatgaaaagattgagaatataaatgatcag
tattggactttacgagcagaggagattccagaagaggagaagaatctgggtccaaataac
cgtttaatccatgtttatcatttcacaaaagatgcatcccagaatcacatgcaggtccaa
aattttggagagcctttctttctgcttatccacgaaggtgagactctagcagaggttaaa
caacgaatccagaagaagctgcaggtgtctgatgatgaatttgccaagtggaagtttgca
ttcctctccttgggtcgtcctgattatcttcaagatacagatattgtttcaagtcgcttt
cagaggagggatgtttatggagcttgggagcaatatcttgggttggagcattctgacaat
gcaccaaaaagatcttaccaaactaatcagaaccgtcacacgtttgaaaagccggtgaag
atatacaattga
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integrated database retrieval system
