Cryptomeria japonica (Japanese cedar): 131053573
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Entry
131053573 CDS
T10556
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03440
Homologous recombination
cjf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131053573
03450 Non-homologous end-joining
131053573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjf03032
]
131053573
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131053573
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
131053573
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
131053573
BRCA1-C complex
131053573
NHEJ (non-homologous end-joining)
MRX complex
131053573
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
LRR_F-Box-like
Motif
Other DBs
NCBI-GeneID:
131053573
NCBI-ProteinID:
XP_057844178
LinkDB
All DBs
Position
4
Genome browser
AA seq
804 aa
AA seq
DB search
MGAEARHTAVMGIWSECPKTLSLVWGPKSAMASLSAISALHHGRPTDIAPIGRKSTMPHR
NPSPRSHMQRHRSLHELTYGEDDISTLRILVATDCHLGYMEKDEIRRHDSFYAFEEICSI
AEQKQVDFVLLGGDLFHENKPSRTTLIKTIEILRRYCLNDRPVQFQVVSDQTINFANVFG
HVNYEDPNFNVGLPVFTIHGNHDDPAGVDNLSAIDILSACNLVNYFGKMVLGGSGVGQIT
LYPILIRKDVTSVALYGLGNIRDERLNRMFQTPHAVQWMRPEPQEGCPMSDWFNILVLHQ
NRIKTNPKNAINEQFLPRFLDFVIWGHEHECLIDPQEVSGMGFHLTQPGSSVATSLIDGE
AKPKHVLLLEIKGSQYRPTKIPLQSVRPFEYKEVVLRDDPDLDPNDQTAVLEYLDKLVRD
MIVHAEGRVVSRPDLKIPLVRIKVDYTGFTTINPQRFGQKFVGKVANPHDVLLFSKSTRR
QQSVDEKIQDAERLRPEELNQQNIEALVAESNLKMEILPVNDLDVALHEFVNKDDKLAFS
TCVQQNLEETRNKLVKEAEVLQIKEEDDVVLKVGQCMQERERDRALHPKTGFSGGLGSQT
SQVTKTKKSSQLASQNAFSDEEDEHVKVTKSKTVVWGQKTKSSQVSTVATDVADSRGRGT
RGRGRGRGSRSLKQTTLDVTLGKRHSERSASAAASAALHSVIDDVEDVDSPSSDEIGKDE
LDEPENGSEPDETPKSARGRKRPAPQGRGKGRAASSTAKRGRKSGNSVVRQMFIDDDEDE
NDNNEPITKTATPQVSRNWGSLRR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggaagccagacacacggctgtcatgggcatttggagcgaatgccctaaaacc
ctgtcgctcgtttggggacccaaatctgccatggcttcgctctctgccatctccgcgctt
caccacggacgcccaactgacattgccccaatcgggaggaaatccaccatgccccacagg
aaccctagcccacggagccacatgcagcgacatcgcagtttgcatgaactgacttacggg
gaagatgatattagtactttgcggatccttgttgctacagattgccaccttggttatatg
gaaaaggatgaaattcgacgccatgattcattttatgcatttgaggagatctgctcaata
gctgagcaaaaacaggtagattttgtgcttcttggtggtgatcttttccatgaaaacaag
ccatcaaggacaactctaataaaaacaatagaaattttgcggcgttactgcctcaatgat
cggccagtacagtttcaagttgtcagtgatcaaactataaattttgcaaatgtatttgga
catgttaattatgaggatcctaatttcaatgttggattgccagtattcactatccatgga
aatcatgatgatccagcaggagtggataatctttctgcaatcgatattctttctgcatgt
aatcttgtgaattactttggaaaaatggttcttggaggctctggtgttggtcagatcact
ctttatccgatactcataagaaaggatgttacatcagtggctctttatggccttggaaat
atacgtgacgagcggcttaatcggatgtttcagacacctcatgctgttcaatggatgcga
cctgaacctcaggagggatgccctatgtcagattggttcaacattttggtactccaccaa
aacaggatcaaaacaaatccaaagaatgcaatcaatgagcagttccttccacgctttctg
gattttgttatttgggggcatgaacatgaatgcctgattgatccacaggaagtatctgga
atgggatttcatttaacacagccaggatcatctgttgctacatctctcattgatggtgaa
gcaaagcccaaacatgtgcttcttttggaaataaaggggagtcaatatcgaccaactaaa
attccattgcaatctgtgaggccttttgaatataaggaggttgttctaagggatgaccct
gacttagatcccaatgaccaaactgcagttcttgaatatctagataaattggtcagagat
atgattgtacatgctgaagggagggtagttagtcgcccagacctgaagatacctttagtt
cgaattaaggttgattatacaggtttcacaacaataaatcctcagaggtttggccaaaag
tttgtgggaaaggttgcaaatcctcatgatgtacttttattttcaaagtctacaagacga
caacaatcagtggatgaaaagattcaagatgctgaacgtcttcgacctgaagaactgaac
cagcaaaatattgaggcgctagttgcagaaagtaatctgaaaatggagatccttccagtt
aatgatctagatgttgcattgcatgaatttgttaataaggatgataaactggctttctct
acttgtgtacagcaaaatcttgaggagacacggaataagctcgtcaaagaagcagaagta
ctgcaaatcaaagaggaggatgatgtcgtcctcaaagtgggtcaatgtatgcaggaacgt
gaaagagaccgagcattacatccaaaaacaggcttttctggtggattaggatctcagact
tcacaggtaacaaaaactaaaaaatcatcacaattagccagccaaaatgcattcagtgat
gaagaagatgaacacgtaaaggttaccaagtcaaaaactgtagtttggggacagaaaaca
aaatcctcacaggtttctacagtagcaactgatgtagcagacagtaggggaagaggaaca
cgtggcagaggtagaggaagaggctcacgtagtcttaagcaaactaccttggatgttact
ttgggaaaacgtcactcagagaggagtgcatctgctgcggcatcagcagctcttcatagt
gttattgatgatgtagaggatgtagattcaccttcgagtgatgaaatcggaaaagatgaa
ttagatgaaccagagaatggctcagaacctgatgaaacccccaaaagtgcaagaggacgg
aagagacctgccccacaggggaggggaaagggacgagctgcaagctccacggccaaaagg
ggaaggaagtcaggaaattctgtagtcagacagatgttcattgatgatgatgaagacgag
aatgataacaatgaaccaataacaaaaactgctactccccaggttagtcgaaattgggga
tctttgaggagatag
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integrated database retrieval system
