Cryptomeria japonica (Japanese cedar): 131054580
Help
Entry
131054580 CDS
T10556
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131054580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131054580
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131054580
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131054580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
131054580
NCBI-ProteinID:
XP_057845105
LinkDB
All DBs
Position
3:complement(87649490..87651103)
Genome browser
AA seq
248 aa
AA seq
DB search
MASAGTSTGTTTSTDDGLLIREVWAANLEEEFTLISEFVDDYPYLAVGTEFPGVVFNPVG
SFQSDAEYKYAELRDNVNLFKLIQLGFTFSDKNGNLPKCGTNQECVWQLNFREFNSHINK
HNIFSIEMLKKCGIDFQRNEQFGIDSKVFRDLFMSSRVVLNENVLWISFQGRYDFGYLIK
LLTNQDLPKDQAEFFKLFWTYFPKSYDIKNLLKLCSKELLGGLDTLANKLKVERVGTKHQ
AGSDSLLN
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgcagggacaagcaccggtacaacgacaagcacggatgatggtcttttaatt
cgtgaggtatgggcagccaatctggaagaagaattcacgttaattagtgaattcgtagat
gattatccatacttagccgtgggcacagagtttcctggggttgtttttaaccctgtgggc
agtttccagagtgatgcagaatacaagtacgccgagctcagagacaatgtgaatctattt
aaattaattcaattgggtttcacattttccgataagaatggcaacttgcccaaatgtgga
actaatcaggaatgcgtctggcagttgaatttcagggagttcaatagccatattaataag
cataatattttttcgatcgagatgcttaagaagtgtggtattgattttcagaggaatgag
caatttggtattgattccaaagtttttagggatcttttcatgtcctctcgggtggtgcta
aatgagaatgtgctgtggattagctttcaagggagatatgattttgggtacctgataaaa
ttgctcacgaaccaagatctgccgaaagatcaagctgaatttttcaagctattttggacc
tatttccctaaatcgtatgatatcaagaatttgttaaaactttgtagtaaagagctcctt
ggtggattggacacgcttgcaaacaaactcaaggtggaaagggttggaactaagcatcaa
gctggctctgatagcttgcttaattaa
DBGET
integrated database retrieval system
