Cryptomeria japonica (Japanese cedar): 131054860
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Entry
131054860 CDS
T10556
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131054860
Membrane trafficking [BR:
cjf04131
]
Autophagy
Other autophagy associated proteins
Others
131054860
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_Vps41
BCAS3_WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_IFT140_2nd
Beta-prop_WDR19_1st
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_IFT80_2nd
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
131054860
NCBI-ProteinID:
XP_057845467
LinkDB
All DBs
Position
9:672711658..672730490
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AA seq
400 aa
AA seq
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MATVAPPTSTSSPTIDPSPDPNLPSSPEAANSESALLLYAGFNQDSGCFAVGTEQGFQIY
NCDPFRETFRRDFNNGGGIGIVEMLFRCNILALVGGGSNPQFPPNKVMIWDDHQSQCIGE
LSFRSEVRAVKLRRDRIVVVLEHKIYVYNFGDLKLLHQIETIANPKGLCAISHASNSFVL
ACPGLHKGQMRVEHYGLKKTKFISAHDSRISCFALTLDGGLLATASTKGTLVRIFNTLDG
TRLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHIFGLNVPRMAEDPRIGEGMQGVS
GTNGSGVNLVVPSLGANPGSSLSFMKGVLPKYFSSQWSFAQFHLPEGLQFLVAFGHKKNT
IIIVGLDGSFYRLAFDPVHGGEMVQQEYAKFLKSDESNVL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggtggcgccaccaactagtacaagttccccaacaattgacccttctcccgat
ccaaatctgccttcttctccggaagccgccaattcggaatccgccttgctgctgtatgca
ggcttcaaccaggattctggctgttttgccgttggcacagagcaggggtttcagatatat
aactgcgatcctttcagagaaacatttcggcgggatttcaacaatggcgggggcattgga
atcgtggagatgttattccggtgcaatattttggccctcgtaggcgggggttcgaatccc
caattccctcctaacaaggttatgatatgggatgatcatcagagccagtgtatcggggag
ttgtccttccggtcggaggttcgggccgtgaaattgcgacgggaccgtatcgttgtggtg
ctggagcacaagatttatgtgtataatttcggggatttgaagctcttgcatcagattgag
accattgcaaaccctaagggtttgtgtgctatttctcatgcgtctaattcgtttgttttg
gcctgccctggcttgcacaaggggcagatgagggttgagcactatggtctcaagaagact
aaatttatttcggctcacgattctcgcatttcatgcttcgccctaactcttgatggaggc
cttcttgcaactgctagcacaaaagggactcttgttcggattttcaacacacttgacgga
accagattgcaagaggttcgtaggggtgctgatagggcagaaatctacagtcttgcgttt
tcttcaaatgcccagtggttagcagtttcaagtgataagggaacagtgcatatttttggt
ctcaatgtaccccggatggcagaggatccaaggattggtgaaggcatgcaaggggtctca
gggacaaatggttctggtgttaatctagttgttccttcattaggagctaaccctggctct
tcactttcttttatgaaaggagttctgccaaaatattttagctcccaatggtcttttgca
cagtttcacttgccggagggtttgcaatttcttgtagcatttggccataaaaagaacaca
attattattgttggccttgatggaagcttctacaggcttgcatttgatcctgtgcatggt
ggtgaaatggtgcaacaagagtatgcaaaatttctgaaatcagatgaatccaatgtcctt
tga
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