Cryptomeria japonica (Japanese cedar): 131054931
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Entry
131054931 CDS
T10556
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131054931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjf03021
]
131054931
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
131054931
Prokaryotic type
Archaeal type
TFB
131054931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Ribosomal_S27e
Cyclin_N
HTH_Tnp_ISL3
RB_B
HTH_5
DUF7573
WHD_GDS1
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
131054931
NCBI-ProteinID:
XP_057845520
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All DBs
Position
2:complement(644424322..644449597)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEVNCPDCKKQTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANEAGDNDPVRVG
GPSNPLLTDGGLSTVISKPNGQSGDFLTSSLGRWQNRGSNPDRSLIMAFKTIATMSDRLG
LVATIKDRANEIYKKVEDSKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGASK
KEVGRAKEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMNHQTVKAATEAVKKSEEL
DIRRSPISIAAAAIYMISQLSDDKKPLKDISRATGVAEGTIRNSYKDLYPHASRLIPDWF
AKEEDLKNLCAP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatagaggtaaattgcccagactgcaagaagcagacggaagttgtgtttgatcattcg
gcaggagacacggtgtgcctggagtgtgggcttgtgctggaggcacactcgatcgacgag
acgtcggagtggaggacgttcgctaatgaggcgggggacaacgatccagtgcgtgttgga
gggccctctaatcctctgctcaccgatggcggcctctccactgtaatttccaagcccaac
ggccagtctggagatttcctcacgtcctcgcttggccgctggcagaaccgcggctccaat
cccgaccggtcgctcatcatggccttcaagaccatcgccacaatgtcagatcggttgggt
cttgttgcaactataaaggatcgagcaaatgaaatttacaagaaggttgaagattcaaag
tcaattcggggaagaaatcaggatgccatcttagctgcttgcctctatattgcatgcagg
caagaggataaacctcgtacagtgaaagagatttgctcagttgcaaatggagcttcaaaa
aaggaagtgggccgagcaaaggagttcattgtgaaacagctagaagaagaaatgggtaaa
tccatggagatgggaacaattcatgctggggactttttgagacgtttttgttcacatctt
ggcatgaatcatcagactgttaaagctgctacagaagccgtaaagaagtcagaggagctt
gatataaggaggagccccatttccattgcagcagcagcaatctacatgatatctcaactg
tcagatgacaaaaaacctcttaaagatatatcacgagctacaggagtagcagagggtaca
atcaggaactcatataaggacttatatccccatgcatcaaggctgataccagattggttt
gcaaaggaggaagatttgaaaaatttgtgtgccccttaa
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integrated database retrieval system
