Cryptomeria japonica (Japanese cedar): 131055170
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Entry
131055170 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131055170
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131055170
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131055170
MMR (mismatch excision repair)
131055170
DSBR (double strand breaks repair)
HR (homologous recombination)
131055170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131055170
NCBI-ProteinID:
XP_059071786
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All DBs
Position
2:complement(660172290..660186780)
Genome browser
AA seq
367 aa
AA seq
DB search
MDLQTKNICNVSGFGEEEGVESVCETSVLKRCDPDVVALEEKSCYTPINEVINCNNNSLA
DVICVIVNVGEISIILIKDGTEVKKRIVKINDMSTFTIDVNLWGITLEELGEDLKNMHKY
GTFVILSMQNARVGYFNRKVINMTTATIINTNPCIPEAEPLILRGEIPEYLHPHSAGGNQ
ISSQYNRMTIASILEHMSIAPKIIETTITTVLKFINDDHFYYIACPLQINGKECKKKCTR
LNDNSWMCPRYQTQVLEYNYKYLLQMKLQDPTNNLWANGFNEFDTKLLGTFAKELYILQY
DMTIGKTPRSIIDKVIPMHYTFTLLVSTDTYNFERRLKVIVNKVAKVDFEAQCIDLLAEI
ARMGAAT
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggacttgcagacgaagaatatttgtaatgtctcaggttttggagaagaagagggtgtt
gaaagcgtttgtgaaacttcggttttgaagcgttgtgatcccgatgttgttgcattagag
gagaaatcttgttacacccctattaatgaagttataaactgcaacaacaattctctagct
gatgtgatttgtgtcatagtgaatgttggagaaatctcgataattcttataaaagatggg
actgaggtgaaaaagagaatagtcaaaataaatgatatgtcaactttcacaattgatgtt
aatctatggggaataacattagaagaattaggtgaggacttgaagaatatgcataaatat
ggaacatttgtgatcctttctatgcagaatgcccgagtaggctatttcaataggaaggtt
atcaatatgacaactgcaacaattataaatactaacccttgcattcctgaagcagaacct
ctaatattgagaggagaaataccagaatacctccatccacactctgcaggtggcaatcag
attagtagccaatacaatagaatgacaattgcatccatccttgaacacatgagtattgca
ccaaaaattattgagaccactattacaactgtactcaaattcataaatgatgatcatttt
tattatatagcttgtccactacaaatcaatggtaaagaatgtaaaaagaaatgtactcgg
ttaaatgataattcatggatgtgccccagatatcaaacacaagtgcttgaatataattat
aaatacctcttacagatgaaactacaagatccaacaaacaacctttgggctaatggattc
aatgagtttgacacaaaattgttgggtacatttgccaaggaactttacattctacaatat
gatatgacgataggaaaaacacctcgttctataattgacaaggttataccaatgcactac
acctttacactattggtatcaactgacacatataattttgaacgtagattgaaagtaata
gttaacaaagtagcaaaggtcgattttgaagctcagtgtatcgatttgcttgcggagatt
gctcgcatgggtgcagctacatga
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