Cryptomeria japonica (Japanese cedar): 131055598
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Entry
131055598 CDS
T10556
Name
(RefSeq) zinc finger CCCH domain-containing protein 42 isoform X1
KO
K13107
RNA-binding motif protein, X-linked 2
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjf03041
]
131055598
Spliceosome [BR:
cjf03041
]
Complex B
Other components
RES complex
131055598
Complex C
131055598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Torus
RRM_5
DIKK1-2-4_C-subdom2
Motif
Other DBs
NCBI-GeneID:
131055598
NCBI-ProteinID:
XP_057846061
LinkDB
All DBs
Position
7:complement(54392158..54488532)
Genome browser
AA seq
626 aa
AA seq
DB search
MNPLTQVKNIQKITAREAAAGISEDASWHAKYKESAYIFVGGLPYDLTEGDLLAVFAQYG
EIVDVNLVRDKGTGKSKGFAFLAYQDQRSTILAVDNLNGATVVGRTVRVDHVANYKKKKE
EDEEEEKRKREERGVCYAFQRGECNRGSACRFSHDEQRNANTGWGGKDNDSKWKHDEYEH
AHNRGQQTKSRVNSKEDIQVGDERSRPSQNLGRLSKDHSQHRHLDAKHTDTMEKDARWSK
PDDRKVTQNRLMDENQQKDDRSRYMDTAASRKKDYIRDFGSGPRDTQERDGKRLRDTRER
DDVKRSRDIYERDTHERDDGKRPRDTHEKDDGKRSRDRHERYEGKRSRDTHEKDAYERES
GKKLRDTYERDAGQRLRDKNETDDGKRSRVTNEKHNGKRPRDTNERDEGGTLRDANERDD
GKWPKDTKEREDGKRPRDTNEREDGKKLRNADVRDDGKSLRDANAIDNGKRLRDTNARDD
GKKVRDDGEMLRDTSERDDDKRSREINERDDGKWSKDHNSKDYSRRDYVREDGKKLRNAD
VRDDGKSLRDANAIDNGKRLRDTNVRDDGKRVRDDGEMLRDTSERDDDKRSREINERDDG
KWSKDNNSRDYSRRDYDRNVKVTEKK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgctaacacaagttaaaaacatacagaaaataactgcgagggaagcagctgca
gggatatcagaggacgcttcctggcacgccaaatacaaggagtctgcttatatctttgtc
ggtggtctcccatatgatctcacggaaggcgacttgctcgcggtattcgcccagtatggg
gaaatagtagatgtcaaccttgtgagagacaaaggtacaggaaaatcaaaaggctttgcc
ttcttggcatatcaagatcaaaggagcaccatccttgccgtagataatttaaatggggca
actgttgtaggccggactgtgagagttgatcatgtcgcaaactacaagaagaaaaaagaa
gaggatgaggaggaagagaagcggaaaagggaggagcgtggagtttgctatgcatttcag
aggggtgaatgcaaccgtggatcagcatgcagattttcacatgatgaacagaggaatgcg
aatactggttggggtggcaaagacaacgattcaaaatggaagcacgatgaatatgagcat
gctcacaataggggccagcagacaaaatctagagttaattcaaaagaagacattcaagtt
ggagatgaaaggtcaagaccttcacaaaatcttggccggctgtcaaaagatcacagtcaa
cataggcatctggatgccaaacatacagacacaatggaaaaagatgctagatggtcaaag
cctgatgacagaaaggtaacgcagaataggttaatggacgagaaccagcagaaggatgac
cgaagccgctatatggatacagcagctagcaggaagaaagattacataagagattttgga
tcagggcccagagatacacaagagagagatggcaaaaggttaagagatacacgtgagaga
gatgatgtcaaaaggtctagagatatatatgagcgagatacacatgagagagatgatggc
aaaaggccaagagacacacatgagaaagatgatggcaaaaggtcaagagatagacacgag
agatatgaaggcaaaagatcaagagatacacatgagaaagatgcttatgagagagagagt
ggcaaaaagttgagagatacatatgagagggatgctggccaaagattgagagataaaaat
gagacagatgatggcaaaaggtcgagagttacaaatgagaaacacaatgggaaaaggcca
agagatacaaatgagagagatgaaggtggaacattgagagatgccaatgagagagatgat
ggaaaatggccaaaagatacaaaagagagggaagatggaaaacgaccaagagatacaaat
gagagagaagatggaaaaaaactgagaaatgcagatgtgagagatgatggaaaaagtttg
agagatgcaaatgccatagataatggaaaaagactgagagatacaaatgcaagagatgat
ggaaaaaaggtgagagatgatggagaaatgctgagagatacaagtgagagagatgatgac
aaaaggtcgagagagataaatgagagagatgatggtaaatggtcaaaagatcacaattca
aaagactactctagaagagattatgtgagagaagatggaaaaaaactgagaaatgcagat
gtgagagatgatggaaaaagtttgagagatgcaaatgccatagataatggaaaaagactc
agagatacaaatgtaagagatgatggaaaaagggtgagagatgatggagaaatgctgaga
gatacaagtgagagagatgatgacaaaaggtcgagagagataaatgagagagatgatggc
aaatggtcaaaagataacaattcaagagactactctagaagagattatgatagaaatgtc
aaagtgacagaaaagaagtaa
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