Cryptomeria japonica (Japanese cedar): 131055727
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Entry
131055727 CDS
T10556
Name
(RefSeq) zinc finger protein NUTCRACKER
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjf03000
]
131055727
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131055727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_4
zf-met
zf-C2H2_STOP2_C
Fungal_virus_P2_N
Motif
Other DBs
NCBI-GeneID:
131055727
NCBI-ProteinID:
XP_057846113
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All DBs
Position
7:complement(721811726..721815499)
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AA seq
661 aa
AA seq
DB search
MSNMTGEASFSSGNRGDVNMLSTGAGTSSNPSQQAPVKRKRNLPGTPDPEAEVVALSPKT
LMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEIKKRVYICPETSCVHHHP
SRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR
RDSFITHRAFCDALAEESARLSGGINAGVGQVHNHLGIVQGAGGAAASMSHIMGAPPPSR
FGGLNPSDGQFNPSAYREAFGTNAGPSGGVNPRARLPLWLGQGTGDPQPSNSMDVTASGF
FNKSMLGSSEYDDSHGAKPLPALLTMTSSNSGSLYSNLFTSGSMNAASSALQNNDSYGGN
WTDRSSGNARLSLSTSTGLTTNSSSVTNNINDGSNPPSSVYHGGHSAQMSATALLQKAAQ
MGATTSNSSMIRGFGMPGSNNNTVGLGLLWQGTPPDQERGHGTVNLMLNNTFNGAHNWNP
FMKGSLEHMTEGGGGAGGSGGYNQSSARSAENAGLNDLMNSFSGSPSGVSLNAMHSSFSS
SMADSGNLSALNMIPTRPNTKDGTRQSFQMASMMMQGGSNQPRNEDGSEDGLTRDFLGVG
GIQLGGMHARTFSQRDHFAAATFTSLGSGMDMTSFSTRRAENIHPIGANHSQSPVRSWDA
T
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacatgactggtgaagcgagtttctcatctggcaacagaggtgatgtgaatatg
ttatccactggagcagggacatcatcaaacccttcccagcaggccccagtcaagagaaaa
cgaaatctcccagggacaccagacccagaagccgaagtggtggctctgtcacccaaaact
ctgatggccaccaacagatttgtgtgtgaaatctgtaacaagggcttccagagagaccaa
aacctgcaactccataggcgagggcataacctaccatggaagctacggcaaagaacgagc
aaggagataaagaagagggtatacatatgtcccgagacatcgtgtgtgcatcaccaccca
tccagagcgctgggagacctgactggtattaagaaacacttctgtcgaaagcacggcgag
aagaaatggaagtgcgataagtgctccaagcgatacgccgtccaatcggactggaaagcc
cattccaagacctgcggcacccgcgagtacagatgcgactgtgggactcttttctcaagg
agggacagctttataacccacagagcattttgcgatgcactggctgaggaaagcgcaaga
ctatctggtggaattaatgcaggagttgggcaggtgcacaatcatttgggcattgtccag
ggagctggaggggcagctgcctcaatgtctcacataatgggggctcctcctccatcgaga
tttggaggattaaatccttcagatggccagttcaatccatcagcctacagagaggcattc
ggtactaatgcaggaccctcaggaggagtgaacccaagagctaggcttccattgtggttg
ggacaaggcactggagatccacagccctcaaattctatggacgttacagcttcaggtttc
ttcaacaaatccatgttgggatcttcagagtacgatgattcccatggagcaaagccccta
ccagccttattaacaatgacatcttctaactcgggaagcctctattccaatctattcact
tcggggtccatgaatgctgcttcctcagccctgcaaaataatgacagctatggaggtaat
tggacagacagaagctcgggtaacgctcgtctttctctgtcaacttccacaggattgaca
accaattcttcctcagttacaaacaatatcaatgatggaagcaaccctcctagcagtgtg
tatcacggtggccacagtgctcagatgtctgcaactgctttgcttcagaaagctgctcaa
atgggtgcaaccactagcaattcttccatgattagaggcttcggtatgcctggatcgaat
aataatacagtgggtttgggattgttgtggcaaggaacacccccagaccaggaaagaggc
catggaacagtaaacctaatgcttaataataccttcaatggagctcacaattggaatccc
tttatgaaaggctctcttgagcatatgacagaagggggtggaggtgcgggtgggagtggg
ggttataatcagtcaagcgcgagatcagcagagaatgcaggtcttaatgatctgatgaac
tctttttctgggagtcccagtggagtaagcttgaatgccatgcactcctcattcagctca
agcatggctgattctggaaacttgtcggccttgaatatgatacccacaagacccaatacc
aaggatggcacaagacagagctttcaaatggcatccatgatgatgcagggaggaagcaat
cagcccagaaatgaagatgggtcagaagatggattgacgagagattttctaggcgttgga
ggtattcaacttggaggaatgcatgcaagaaccttctctcagcgggatcactttgcagca
gccactttcacttccctaggatcgggaatggacatgacttcttttagtactcgaagggca
gaaaacattcaccctattggtgcaaatcatagccaatcacctgtgagatcatgggatgct
acttga
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