Cryptomeria japonica (Japanese cedar): 131056616
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Entry
131056616 CDS
T10556
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131056616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131056616
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjf04147
]
131056616
Membrane trafficking [BR:
cjf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
131056616
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
131056616
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131056616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
Ank
BAR
PH
Ank_3
Ank_4
Ank_5
BAR_2
PH_8
PH_11
ANK_LRRK2
PH_20
PH_13
CTD8
Motif
Other DBs
NCBI-GeneID:
131056616
NCBI-ProteinID:
XP_057846903
LinkDB
All DBs
Position
6:579816669..580034810
Genome browser
AA seq
831 aa
AA seq
DB search
MNFGKLDDSPMFRKQVQASEENAEALRERCQKFYKGCRKYTEGLGEAYDGDIAFASSLET
FGGGHDDPISIAVGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLANFVNSDLQDVKE
VRKRFDKATLHYDQVREKFMSLKKSTRIDIVTETEEDLHNARSAFEQARFNLVTALSNIE
AKKKFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYIHQVLTYAQQSRERTNYEQSALAER
MEEFRKQIELENQRSFNDIDTSPSGDGIQAVGRSSHKMIEAVMQSTMKGKVQTIKQGYLL
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQWSKPAGPGNQQSIQRAPSSSEHVAGLIGRLL
SSGHNIPQEEKSVTHHTVNLLTSTIKVDAEQTDLRFCFRIISPTKNYTLQAENAVDRMDW
IDKITAVIASLLNSQLPEQVGYSQRVSRIPRVSGHQGKISDTNSWSSSSDLEQSTANEYA
SVRSYVPSCQDTHRGMQGHVAAEQQERPLDTLRKVPGNDVCADCGCHDPDWASLNLGILL
CIECSGVHRNLGVHISKVRSLTLDVRVWELSVISLFQSLGNMYANSIWEELLETGKHNGD
AHNRLDNHQQMADIMSINKPKPRDALSIKEKFIQAKYAEKQLVSKERSDLELPSVDFRMW
EAVQRNDKQMAYCLLIMSDANIATNYEQAKSGIKGNSVDHDISESSCRESMQHSDSGTSS
PSIETHTDDYIELEGGLKGCSLLHLACHTGDLAMLELLLQYGADVNAQDYYGRTPLHHCI
SKGNNQYAKLLIRRGASAMIADGRGKTPLQRAMEMGAIPDDELFLLLSEHN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgggaagctggatgactcgcctatgtttcggaaacaggtacaagcatcagaa
gaaaatgcagaagcattacgggagcgttgccagaaattttacaaaggatgtcggaaatat
accgaaggacttggagaagcatatgatggagacattgcttttgcaagttctttagaaaca
tttggagggggacatgatgaccctattagcatagctgttggaggacctgtgatgacaaaa
ttcactattgctttgcgtgaaataggaacatacaaagaagtgcttcgatctcaggtggag
cacatgttaaatgacaggctggcaaatttcgtgaatagtgatttacaagatgtaaaggag
gtccggaagcgttttgataaagctacactgcactatgatcaggtccgcgaaaagtttatg
tcattgaagaaaagtactagaatagacattgttacagaaacagaagaggatttgcataat
gcaaggtcagcatttgagcaagctcgcttcaatctagtgactgctctctcaaatattgaa
gctaaaaaaaagtttgagttcttggaagctgtgagtggaaccatggatgcccacctgcgc
tactttaaacagggatatgaattactgcatcaaatggaaccgtacatccaccaggtttta
acatatgcacagcagtcgagggaaagaacaaactatgagcaatctgctcttgcagaaagg
atggaggagtttaggaagcagatagaactagaaaaccagcgctcttttaatgatattgac
acttctccttctggggatggtatccaagctgttggcaggagttctcataaaatgattgaa
gcagttatgcaatccaccatgaaaggaaaggttcaaacaatcaagcaaggttacttgtta
aagcggtcttcaaatttgaggggtgattggaagagaaggtttttcgtccttgatagtcgt
ggaatgttgtattattaccgcaaacaatggagcaagccagcaggacctggaaaccagcaa
tctattcagagggcgccctcctcatctgaacatgttgctggtttgataggccggttgctc
tcttccggtcataatataccacaggaggagaagagtgtgacacatcatactgtaaatctt
cttacatctaccataaaggtggatgcagagcagacagatttacgattctgttttaggata
atttctccaacaaagaattacaccttacaggcagagaatgctgtagatcgaatggattgg
attgacaaaattactgcagtaattgcctcactattgaattctcagttgccagaacaggtg
ggttatagccagagggtttctcgtattccaagagttagtggacaccaaggcaaaattagt
gatacaaattcatggagtagctcttctgatttggagcaatcaacggctaatgagtatgca
tccgtgaggagttatgttccatcctgtcaggatactcatagaggtatgcaggggcatgtg
gcagctgaacagcaagagaggccccttgatacactgagaaaagttcctggaaatgatgta
tgtgcagactgtggttgccatgatccagactgggcttcattaaatctaggcatcttacta
tgcattgaatgctctggtgttcacagaaaccttggtgttcatatttcaaaggttagatct
ttgacactggacgtaagggtttgggaactttctgttatcagtttgttccagtcacttggt
aatatgtatgccaattcaatatgggaggaacttctagaaactggaaagcataatggtgat
gcccataacagactggataaccatcaacaaatggcagatatcatgtctatcaacaaaccg
aagcctagggatgctctttcaattaaggagaagtttatccaggcaaagtatgctgaaaag
caattagtatcaaaggaaaggtctgatctggagctaccatcagtggattttcgaatgtgg
gaagcagttcaaagaaatgacaagcagatggcttactgtcttcttatcatgtctgatgca
aatattgctacaaattacgagcaggctaagtcagggatcaaggggaattctgttgatcat
gatatatctgaaagtagctgtagggaaagcatgcaacactcagattcaggaacatcaagc
ccaagcatagaaacacacacggatgattacattgaattagagggtggcttgaaaggatgc
tcattactgcatctggcatgccatactggtgatctggctatgttagagttattattacag
tacggtgcagatgtcaacgcacaagattattatgggagaactcctctacatcattgtatt
tccaaagggaataatcaatatgcaaagctgctgattagaaggggagcaagtgctatgata
gctgatgggagaggcaaaactcctttacagagagcaatggagatgggtgccattccagat
gatgaactctttctcctactatctgaacataactga
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