KEGG   Cryptomeria japonica (Japanese cedar): 131056638
Entry
131056638         CDS       T10556                                 
Name
(RefSeq) coatomer subunit alpha-1-like
  KO
K05236  coatomer subunit alpha
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cjf04131]
    131056638
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cjf04147]
    131056638
Membrane trafficking [BR:cjf04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    131056638
Exosome [BR:cjf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   131056638
  Exosomal proteins of bladder cancer cells
   131056638
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 WD40_CDC20-Fz TPR_COPA_B Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_SCAP WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_SPT8 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_Aladin
Other DBs
NCBI-GeneID: 131056638
NCBI-ProteinID: XP_057846924
LinkDB
Position
3:complement(194861207..194865303)
AA seq 1242 aa
MAQREVGFGLNWRGKDRRNAGLRRNAANTLEQRECKMLSKFETKSDRVKGLSFHPKRPWI
LASLYSGVIQLWDYRMGTLIDTFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMRR
CLFTLLGHRDYIRTVYFHNKYPWIVSASDDQTIRIWNWQSQVCISVLSGHNHFVMCASFH
LKEDLVVSASLDQTIRVWDVSALRKKTVSPAADILKLTQMSTDLFGGGDVVVKYILEGHD
RGVSWASFHPSLPLIVSGADDYQVKIWRMNDTKAWEVDTLRGHVHNVCCVLFHARQDIIV
SNSEDKSIRVWDMSKRTRVQTFRREHDRFWILSAHPEVNLLAAGHDSGMIVFKLERERPA
YVVSGGSLLYIKDRFLRTYDFATQKDNPLIPICRLGSSGPNQGPRSLSYNPTECSVLICS
DVDGGAYELYDAPRESLGRSDSIHEAKRGIGGSAVFIARNRFAVLNKIHNQVTIKNLNNE
VTKKCDLPFSADTIFFAGTGNLLCRSEDSVILFDLQQRTNIGEIRAPNVKYIVWSNDMEN
VALLSKHTIIIASKKLSERCKLRETIRVKSGAWDDNGIFIYSTLNHIKYCLPNEDSGIIR
TLDVPVYITKVSGSSLYCLDRDGKNRVIQIDISECVFKLALMKKQYDEVMRIIRDSQLCG
QAIIAYLQQKGFPEVALHFARDERTRFNLAVESGNIQIAVASAKEIDEKEHWHKLGVEAL
RQGNADIVEYAYQRTKDFEQLSFLYLITGNLDKLTKMLRIAEIKNDVNGQFHNALYLGDI
EERIKILQESGHLPLAYVTASVHGLTDIADTLAADLGGNLPTLPSGKRSSLLMPPVPILR
GGDWPLLKVIKGIFEGALQNSAGTAYEEEDQGNGADWGEDIAIENANGEVIMADDKEVTV
GEDKDGGWDMEELELPQDVGITHDTLFVTPTQDMPVSQIWIQDSSLAGEHAAAGSFDTAL
ELLNRQLGITNFSPLKPIILDLYMGSHVFLPALASAPVMPLAVERSRNDIGSPNVRGPPA
LVYSLSVVEEKRRVAYRATTEGKFSEALRLFVNILHIIPIIVVDTRKEVDDVKKLIGIAK
EYVLGLRMEIKRKEIKDGALRQQELAAYFTHCKLQIVHLRLALLNAMGICYKGGNYSTAA
NMACRLLETDPPTSHATKASQVLQACERNLQDANQVNYDFRNPFVVCASSFTPIYHGQKS
VSCPYCTSQFVPTMSGKICTICNLSIVGSDASGLLCSATQTR
NT seq 3729 nt   +upstreamnt  +downstreamnt
atggcccaaagggaagtcggttttggtctgaactggagaggaaaggacaggagaaatgct
ggccttcgtaggaatgctgctaataccttagaacagcgtgaatgcaaaatgctgagcaaa
tttgaaaccaagagcgatagggtaaaggggctaagctttcatcccaaaaggccatggatc
cttgccagtctttacagcggagtcattcagttatgggactatcggatgggaactctgata
gacacatttgatgagcatgatgggcctgttcgaggagtacattttcacaaatcacagcca
ttatttgtgtctggaggtgatgactacaagattaaggtctggaactacaagatgcggcga
tgcctttttacactactagggcaccgtgactacattcgtacagtttatttccataacaag
tatccttggattgttagtgcaagtgatgatcaaacgataaggatctggaattggcaatct
caagtttgcatatctgttcttagtggtcacaatcattttgtgatgtgtgcctcttttcat
ctcaaggaggatctggttgtttccgcatcattggatcaaactattcgtgtgtgggatgta
agcgctttaaggaaaaaaactgtttctcctgctgctgatatcttgaagctgacacagatg
agcactgatctctttggaggtggtgatgttgttgtgaagtatattcttgagggacatgac
cgtggtgtaagctgggcctcctttcatcctagcttaccattaattgtgtctggtgcagat
gattaccaagttaaaatttggcggatgaatgatacaaaggcttgggaagttgacacgcta
agaggacatgtacacaatgtgtgttgtgtgttgttccatgcacgccaagacattattgtt
tcaaattctgaagataaaagtatccgagtgtgggatatgtccaagcgtacaagagtccaa
acttttcgtagagagcatgatcggttctggattctttctgcacatccagaagtaaatctt
ctggcagctgggcatgacagtgggatgattgtcttcaaattggagagagagaggcctgcc
tatgtcgtctctgggggctcgctactatatatcaaggatcgttttctgcgtacttatgat
tttgcaactcaaaaagacaatccactaataccaatttgcagacttggttccagtggccca
aatcaagggccaagatctttgtcatacaatccaacagagtgttctgttttaatatgttca
gatgttgatggtggtgcctatgaactttatgatgcgccaagggaaagtcttggtaggagt
gattcaatacatgaggcaaagagaggaataggaggatctgctgtgttcattgcaaggaat
aggtttgctgttcttaacaagatccataatcaggttactataaagaacttgaataatgag
gtgacaaaaaagtgcgatcttccattcagtgcagatacaattttctttgcagggacaggc
aacctactttgtagatcagaagatagtgtaattctttttgatctgcaacagagaacaaac
ataggggaaattcgtgcaccaaatgtcaagtacatagtttggtccaatgatatggagaat
gtagccttgcttagtaagcatacaatcattattgcaagcaagaagttgtcagagagatgc
aaattacgtgagactatacgtgtcaagagtggggcttgggacgacaatggcatttttatt
tactcaactttgaatcacataaaatattgcttgccaaatgaagatagtggtatcatcaga
acgcttgatgttccggtatacataacaaaggtttctgggagttctctttattgcctcgat
agagatggtaagaaccgagttatacagatagatattagcgagtgtgtattcaagctggca
ttgatgaagaagcaatatgatgaagtgatgaggataattagggattctcagctctgtgga
caggccataatagcttacctgcaacagaagggatttccagaggtggcccttcactttgct
agagatgagagaactcgtttcaacttggctgtggagagtggaaacattcaaatagctgtt
gcttctgcaaaagagattgatgagaaggaacattggcacaagctaggagttgaagccctt
cggcagggtaatgctgatattgtagagtatgcatatcaacggacaaaggattttgaacag
ctttcctttctatatctgattactggtaatttagataagttgacaaagatgttgaggatt
gccgaaataaaaaatgatgtaaacggccagtttcacaatgcattatatttgggtgacatt
gaagagcgcattaagattttgcaggaatctggtcatctaccacttgcttatgtcactgca
tctgttcatggtcttacggatattgctgacactcttgcagctgatttgggaggcaatctt
ccaactctaccttcaggaaagagatcatcgcttctgatgcctcctgtaccaattctgcgt
ggcggtgattggcctttgcttaaggttatcaaaggtatttttgaaggtgctttgcaaaat
tctgctggtacagcttatgaagaagaggaccaaggaaatggtgctgattggggtgaagac
attgctatagaaaatgcaaatggcgaagttataatggcagatgacaaagaagttacagtt
ggagaggataaagatgggggatgggatatggaggagttggaacttcctcaagatgttgga
atcactcatgatacattgtttgtaacaccaacacaagatatgccagttagccaaatttgg
atacaagattcttctcttgctggtgagcatgcggctgcaggcagttttgatacagctttg
gagttgctaaatcgtcaacttgggattactaatttctcgccattgaagcctataattttg
gatctgtatatgggcagtcatgtgttccttccagcccttgcttctgcacctgttatgcca
ttagcagtagaaagaagtaggaatgacattgggagtccaaatgttaggggtccccccgcc
ttggtatacagtctttctgtagttgaggagaaacggagagtagcttacagggcaacgaca
gaaggtaagttcagtgaagcattgaggctatttgtgaacattctgcacattatcccaatt
attgtagtagacacaagaaaggaagttgatgatgtaaaaaagttgattggaattgccaaa
gaatatgttcttggtcttcgaatggagatcaagagaaaagaaatcaaagatggtgctctc
cgccaacaggagcttgcagcttatttcactcattgcaaacttcagatagttcatttaaga
ttggctttgctaaatgcaatgggcatctgttacaagggtgggaactatagtacagcggca
aacatggcatgtcggcttttagaaactgaccctccaacaagccatgcaacaaaggctagt
caagtccttcaagcctgtgagaggaatttgcaagatgcaaaccaggtaaactatgacttc
agaaatccttttgttgtctgtgcttcaagttttactccaatataccatggccagaaaagt
gtttcatgtccatattgtacatcacagtttgttcctactatgtctggaaagatttgtacc
atatgcaatctttcaattgtgggttcagatgcatctggactactttgttctgctactcaa
acaaggtga

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