Cryptomeria japonica (Japanese cedar): 131056642
Help
Entry
131056642 CDS
T10556
Name
(RefSeq) coatomer subunit alpha-2-like
KO
K05236
coatomer subunit alpha
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131056642
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjf04147
]
131056642
Membrane trafficking [BR:
cjf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
131056642
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131056642
Exosomal proteins of bladder cancer cells
131056642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
TPR_COPA_B
WD40_RFWD3
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
131056642
NCBI-ProteinID:
XP_059073227
LinkDB
All DBs
Position
3:complement(195202575..195205663)
Genome browser
AA seq
778 aa
AA seq
DB search
MDRWNAGLCRNDANTKCEYKMLFETNSARVKGLSFHPTRPWILASLHSGIIQLWNYQMGI
LIGRFDEHGRQPVRGIHFHNSQPLFVSGGDDFKIKVWNYKIRRCLFTLLGHHDYIRTVYF
HNEYPWIVSASDDQTIRIWNWQSRDCISVLRGHSHFVMCASFHLKEDLVVSASLDRTVCV
WDVSAVRKKTVSPADDILKLTQVSTDLFGGGEGVVKYVLVGHDHGVNWASFHPSLPLIVS
AADDYQVKLWRMNDTNAWEVDTLRGHTYRVSSVLFHARQDIIVSSAEDKSIRVWDMPERT
TVQTFRRESDRFWILSAHPEVNLLAAGHDHGIIVFKLDMERPMPAYDVSGGSLLYIKYRF
LRTRKDNPLMPISRSGSSGPNQGPRSLSYSPTECAVLICSDVDDGAYELYVVPRDSLGRT
DSVHDAKRVIGVYAVFAARNRFAVLDKNHNQVTIKNLKSEVTKKCDLPFNADTIFFSETG
NLLRRSEDSVILFDIQQRTNLEEIRTPNVKYIVWSNDMENVALLTKHAIIIASKKLSERC
KLQETISVKCEAWDDNAIFIYSTLNHIRYCSPNGDSGIIRTLDVPVCITKVSGSSLCCLD
RDVKNRIVQLDTSECVSKLVLMKKKDDEVMSMIRNYQICGQAIIVYLQQKGFPEVALHFA
RDERTQFNFSVKSGNIQIAVASAKEVDEKERWYLQEEWKHSNSLACQRTENFERLSFLYL
ITGNSDKLAKMLRISEQLKTTMGQFQMHSALYLGDIKERIKSLQNITAFVHGLTDITY
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggacaggtggaatgctggcctttgtaggaatgatgctaatacaaaatgtgaatacaaa
atgttgtttgaaaccaatagcgctagggtaaagggcctaagctttcatcccacaaggcca
tggatccttgccagtcttcacagcggcatcattcagttatggaactatcagatgggaatt
ctgataggcagatttgatgagcatggtaggcagcctgttcgaggaatacattttcacaat
tcacagccattatttgtgtctggaggtgatgatttcaagataaaggtctggaactacaag
atacggcgatgcctttttacactactagggcaccatgactacattcgtacagtttatttc
cataacgagtatccttggattgttagtgcaagtgatgatcagacaataagaatctggaat
tggcaatctcgagattgcatatctgttcttcgtggtcacagtcattttgtaatgtgtgcc
tcttttcatctcaaggaggatctggttgtttctgcatcattggatcgaactgtttgtgta
tgggatgtaagtgctgtaaggaaaaaaactgtttctcctgctgacgatatcttgaagctg
acgcaggtgagcactgatctctttggaggtggtgaaggtgttgtgaagtatgttcttgtg
ggacatgatcatggtgtaaactgggcctcatttcatcccagtttaccattaattgtgtct
gctgcagatgattaccaagtcaaactttggcggatgaatgatacaaatgcttgggaagtt
gacactctaagaggacatacataccgtgtgtctagtgtgttgttccatgcacgccaagac
attattgtttcaagtgctgaagataaaagtatccgagtgtgggatatgcccgagcgtaca
actgtccaaacttttcgtagagagagtgatcggttctggattctttctgcacatccagaa
gtgaatcttctggcagctgggcatgaccatgggataattgtcttcaaattggatatggag
agacctatgcctgcctatgatgtctctgggggctcgctactatatatcaagtatcgtttt
ctgcgtactcgaaaagacaatcccttaatgccaattagcagatctggttccagtggccca
aatcaagggccaagatctttgtcatacagtccaacagagtgtgctgttttaatatgttca
gatgtcgatgatggtgcttatgaactttatgttgtgccaagggatagtcttggtagaact
gattcagtacatgacgcaaagagagtaataggagtatatgctgtgtttgctgcaaggaat
aggtttgctgttcttgacaagaaccataatcaggttactataaagaacttgaaaagtgag
gtgacaaaaaagtgcgatcttccattcaatgcagacacaattttcttttcagagacaggc
aacctacttcgtagatcagaagatagtgtaattcttttcgatatacaacagaggacaaac
ttagaggaaattcggacaccaaatgtcaagtacatagtttggtcaaatgatatggagaat
gtagccttgcttactaagcatgcaatcattattgcaagcaagaaattgtcagagagatgc
aaattacaagagactataagtgttaagtgtgaggcttgggatgacaatgcaatttttata
tactcaactttgaatcacataagatattgctcgccaaatggagatagtggtatcatccga
acccttgatgttccagtatgcataacaaaggtttctggaagttctctttgttgcctagat
agagatgttaagaaccgaattgtacagttagatactagtgagtgtgtatccaagctggta
ttgatgaagaagaaagatgatgaggtgatgagcatgattaggaattatcagatctgtgga
caggccatcatagtttacctgcaacagaagggatttccagaggtggcccttcactttgct
agagatgagagaactcaattcaacttttctgtgaagagtggaaacattcaaattgctgtt
gcttctgcaaaagaggttgatgagaaggaacgctggtatttgcaagaagagtggaaacat
tcaaatagcttagcatgtcaaaggacagagaattttgaaaggctttcctttttgtatctg
attacaggtaattcagataagttggcaaagatgttgcggatatccgagcaattaaaaact
acaatgggccagtttcaaatgcattcagcattgtatttgggtgacattaaagagcgcatc
aaaagtttgcagaatattactgcatttgttcatggtcttacggatattacttattag
DBGET
integrated database retrieval system
