Cryptomeria japonica (Japanese cedar): 131056643
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Entry
131056643 CDS
T10556
Name
(RefSeq) coatomer subunit alpha-2-like
KO
K05236
coatomer subunit alpha
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131056643
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjf04147
]
131056643
Membrane trafficking [BR:
cjf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
131056643
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131056643
Exosomal proteins of bladder cancer cells
131056643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_TEP1_C
EIF3I
Beta-prop_CAF1B_HIR1
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
131056643
NCBI-ProteinID:
XP_057846925
LinkDB
All DBs
Position
3:complement(195003973..195007162)
Genome browser
AA seq
802 aa
AA seq
DB search
MDRWNAGLCRNDANTKCEYKMLFETNSARVKGLSFHPKRPWILASLHSGIIQLWNYQMGT
LIGRFDEHGRRPVRGIHFHNSHPLFVSGGDDSKIKVWNYKIRRCLFTLLGHRDYIRTVYF
HNEYPWIVSASDDRTIRIWNWQSRDCISVLYGHSHYVMCASFHLKEDLVVSASLDRTVCV
WDVSAVRKKTVSPADDILKLTQVSTDLFGGGEGVVKYVLVGHDRGVNWASFHPSLPLIVS
AADDYQVKLWRMNDTNAWEDDTLRGHTHYVSSVLFHASQDIIVSNSEDKSIRVWDMSERT
ILQTFRRERDRFWILSAHPEVNLLAAGHDRGIIVFKLDRERPAYDVSGGSLLYIKDRFLR
TYDFATQKDNPLIPIRIPGSSGPNQGPRSLSYGPTECAVLICSDVDDGAYELYVVPRANL
GRSDSVHDAKRGIGGYAAFVARNRFSVLDKSNQVTIKNLKSEVTKKCDFPFSADTIFFSE
TGNLFCRSEDSVILFDSQQRTNLGEIRAPNVNYIVWSNDMENVAFLSKHVIIIASKNLSE
RYKLRETIRVKSGTWDDNSIFIYSTLTHIKYCSPNGDGGIIRTLDVPVYITKVSGSSHYF
LDRDFNNRIVQIDTRECVFKLVMMKKKDDEVMSIIRNSQLCGQAIIVYLRQKGFPEVGLP
FARDERTQFNFSVKSGNIQIAIVSAKEIDEKEHWHKLGVVALRQGNARIVEYAYQRTENF
ERFSFLYRISGNLDNLAKMLRISEINKTTMGHFSNALYLGDIKERIKILQDITAFVHCLT
DIICYNKSKLNWHMCCECIKEF
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacaggtggaatgctggcctttgtaggaatgatgctaatacaaaatgtgaatacaaa
atgttgtttgaaaccaatagcgctagggtaaagggcctaagctttcatcccaaaaggcca
tggatccttgccagtcttcacagcggaatcattcagttatggaactatcagatggggact
ttgataggcagatttgatgagcatggtaggcggcctgttcgaggaatacattttcacaat
tcacatccattatttgtgtctggaggtgatgattccaagataaaggtctggaactacaag
atacggcgatgcctttttacactactagggcaccgtgactacattcgcacagtttatttc
cataacgagtatccttggattgttagtgcaagtgatgatcggaccataagaatctggaat
tggcaatctcgagattgcatatctgttctttatggtcacagtcattatgtgatgtgtgcc
tcttttcatctcaaagaggatctggttgtttctgcatcattggatcgaactgtttgtgta
tgggatgtaagtgctgtaaggaaaaaaactgtttctcctgctgacgatatcttgaagctg
acgcaggtgagcactgatctctttggaggtggtgaaggtgttgtgaagtatgttcttgtg
ggacatgatcgtggtgtaaactgggcctcatttcatcccagcttaccgttaattgtgtct
gctgcagatgattaccaagtcaaactttggcggatgaatgatacaaatgcttgggaagat
gacactctaagaggacatacgcactatgtgtctagtgtgttgttccatgcaagccaagac
attattgtttcaaattctgaagataaaagtatccgagtgtgggatatgtccgagcgtaca
attctccaaacttttcgtagagagcgtgatcggttttggattctttctgcacatccagaa
gtgaatcttctggcagctgggcatgaccgtgggataattgtcttcaaattggacagagag
aggcctgcctatgatgtctctgggggctcactactatatatcaaggatcgttttctgcgt
acttatgattttgcaactcaaaaagacaatcccttaataccaattcgcatacctggttcc
agtggcccaaatcaggggccaagatctttgtcatatggtccaacagaatgtgctgtttta
atatgttcagatgttgatgatggtgcctatgagctttatgttgtgccaagggctaatctt
ggtagaagtgattcagtacatgacgcaaagagaggaataggaggatatgctgcgtttgtt
gcaaggaataggttttctgttcttgacaagagtaatcaggttactataaagaacttgaaa
agtgaggtgacaaaaaagtgcgattttcctttcagtgcagacacaattttcttttcagag
acaggtaacctgttttgtagatcagaagatagtgtaattcttttcgattcacaacagaga
acaaacttaggggaaattcgggcaccaaatgtcaattacatagtttggtcaaatgatatg
gagaatgtagcctttcttagtaagcatgtaatcattattgcaagcaagaacttgtcagag
agatacaaattacgtgagactatacgtgttaagagtgggacttgggatgacaacagcatt
tttatttactcaactttgactcacataaaatattgttcaccaaatggagatggtggtatc
atcagaacacttgatgttccagtatacataacaaaggtttctggaagttctcattatttc
ctagatagagattttaacaaccgaattgtacagatagatactagagagtgtgtattcaag
ctggtaatgatgaagaagaaagatgatgaggtgatgagcatcattaggaattctcagctc
tgtggacaggccatcatagtttacctgcgacagaagggatttccagaggtgggccttccc
tttgctagagatgagagaactcaattcaacttttccgtgaagagtggaaacattcaaata
gctattgtttctgcaaaagagattgatgagaaggaacactggcataagctaggagttgta
gcccttcggcagggcaatgctcgtattgtagagtatgcatatcaaaggacagagaatttt
gaacggttttcctttttgtatcggattagtggtaatttagataatttggcaaagatgttg
cggatatccgaaataaacaaaactacaatgggccacttttcaaatgcattgtatttgggt
gacattaaagagcgcatcaagattttgcaggatattactgcatttgttcattgccttacg
gatattatttgttataataagtcaaaactgaattggcatatgtgttgcgaatgtatcaaa
gagttctag
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integrated database retrieval system
