Cryptomeria japonica (Japanese cedar): 131056942
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Entry
131056942 CDS
T10556
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131056942
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
131056942
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_28
AAA_23
MMR_HSR1
AAA_15
AAA_14
RsgA_GTPase
AAA_16
AAA_30
VapE-like_dom
AAA_22
Motif
Other DBs
NCBI-GeneID:
131056942
NCBI-ProteinID:
XP_057847179
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All DBs
Position
8:503711383..503748468
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AA seq
607 aa
AA seq
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MVSDASKQRAAAKKAAAAAKRGAKSAAVTAPKSEAASSTSVEPSQNGKAIASVDKTAEEI
AYMTISDRTCTGVLCSHPLSRDIHIESLSVTFHGHELIVDSELELNYGRRYGLLGLNGCG
KSTLLTALGVRELPIPEHMDIYHLTREIEATDMTSLEAVMNCDEERLKLEKEAEALAAKD
DGGGEALDRIYERLDLLDAATAEKRAAEILFGLGFTKKMQAQKTRDFSGGWRMRIALARA
LFMNPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVVSHSQDFLNGVCTNIIHMQNKK
LKLYTGNYDQYVQTRAELEENQMKQYRWEQEQISSMKEYIARFGHGSAKLARQAQSKEKT
LAKMERGGLTEKVVRDKVLVFRFTDIGKLPPPVLQFVEVDFGYTPENLIYRSVDFGVDLD
SRVALVGPNGAGKSTLLKLMTGDLTPLDGMVKRHNHLRIAQYHQHLTEKLDLEMSALQFM
MHEYNGIDEEKMRAAIGKFGLTGKAQIMPIKNLSDGQKSRVIFAWLAWRLPHLLLLDEPT
NHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAKEIWVCENKSITRWQGDIMDFKQH
LKSKAGL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgatgcgagcaagcagagggcggccgccaagaaggcagccgctgcggcaaag
aggggtgccaagtcagcggcagtcacggcgcccaagtcagaggcggcatcgtctacgtca
gtagagccatcgcagaatggcaaagctatcgccagcgtggacaaaacagctgaagaaata
gcttacatgactatatctgatcggacatgtaccggtgtcctttgttctcatcctctttct
cgagatatacatatagaatccttgtcagttacattccatgggcacgagttgattgttgat
tcagagcttgagctgaattatggaagacgctatggattgcttggacttaatggatgtgga
aaatcaacacttcttacagctctaggagtgcgagagcttcccataccagagcatatggat
atatatcatttgaccagagaaattgaggctactgatatgacttcacttgaagctgtaatg
aactgtgatgaagagaggcttaagcttgagaaggaagctgaagctttggctgcgaaagat
gatggaggtggagaggctttagatcgaatatatgaacgtttggatctcctggatgctgct
acagcagaaaagcgagctgctgaaattttatttggcctgggttttactaagaaaatgcaa
gcacaaaagaccagagacttttctggtggctggcggatgcgaattgcactggcacgtgca
ctattcatgaatcctacaattttgttacttgatgagcctacaaatcatttagatcttgaa
gcttgtgtttggcttgaggaaactctgaagaaatttgatcgtattttggttgtagtatca
cactcccaagacttcctcaatggagtttgtacaaacattattcatatgcaaaataagaag
ttgaaattgtatacaggaaactatgatcagtatgtacaaacacgagctgagctagaggaa
aaccagatgaagcaatataggtgggaacaagaacagatttcttcaatgaaggaatatata
gctaggtttggacatggttctgcaaagcttgccaggcaagcacagagtaaagaaaagaca
ctagcaaagatggaaagaggtgggctaacagaaaaagtagtcagagataaagtattagtg
ttccggttcactgatattggtaagcttccccctccagtgcttcagtttgtggaggtggat
tttggatacactcctgaaaacctcatatacagaagtgttgattttggagttgatcttgat
tcacgggtagcgcttgttggtccaaatggagctggaaagagtactttgctgaaactaatg
actggtgatttgactccattggatggcatggtgaagcgccataatcatctccgaattgct
cagtatcaccagcatttgactgaaaagctagatttggaaatgtctgctctgcagttcatg
atgcatgaatataatggtattgatgaagagaagatgcgtgcagcaattggaaaatttgga
ctcacaggcaaagcacagattatgcccattaaaaacttatctgatggacagaaaagccgt
gtgatttttgcatggcttgcttggaggctacctcatctgcttttgcttgatgaaccaact
aaccatcttgacattgaaaccattgattcccttgctgaagcactgaatgagtgggatggg
ggacttgttctggttagccatgactttcggctcataaaccaggttgccaaagaaatatgg
gtgtgtgaaaataagtccataactagatggcaaggcgatattatggacttcaagcagcat
ttaaagagcaaggctggcctgtga
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