Cryptomeria japonica (Japanese cedar): 131057318
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Entry
131057318 CDS
T10556
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131057318
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131057318
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131057318
MMR (mismatch excision repair)
131057318
DSBR (double strand breaks repair)
HR (homologous recombination)
131057318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131057318
NCBI-ProteinID:
XP_057847444
LinkDB
All DBs
Position
4:134614273..134616609
Genome browser
AA seq
610 aa
AA seq
DB search
MASPAASQQPSTETSEVEQHLQLTPHALLCINAGDDVPSPLLQLLSFEKLIDDENDNARY
KVVLSDATHTQLAILPPKYSGLLLSETLKIGTILSLTAYACRNVWNSRTIIIFSLAVKFT
NSPLLGKPRYLFKEQEQQMLGRDTPATTKRSLKFGIHLPPVQHESSVNISPIKALNPFQN
KWTIKGRVTNKRKMHQYSTPKSTGQVFSFDMIDSEGTEIRITCFGDVAEMHYHRVEPGTY
YTVSKGCVKEANTKWNKLNSHLEITLDNNSILKRCDDVVECEANNSQFTPINEITYCTNN
TLVDVIGIVVAVGEPSLIRRKDGSEVTKRIAKINDASAFTIDVNLWGETWQGLGEDLKSM
HTTQTAIVLAVRNARVGYFNGKVVNTTIATTLNINPSIPETETLMSRGKISDALLPLSCV
AGQLNSQYSRMTITAVLERTSVLSETVESTIRAVVRIIKTDSFCYPACPLKFNGKECKKK
CTQQSDNQWFCSRCQTAVPECNYKYLLQMKLQDHTGALWATAFDEVGTNILQISAKELYM
LQYDLTTQKMPQSIIKHVLLSSFVFTLSITTDMYNAEPRLKATITKVARIDYQAENALLL
AEIAQMTTTA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcctgctgcctcgcaacaaccttctacagaaacttcggaagtggaacaacat
ctacaattgaccccacatgcactgctctgcatcaacgctggggatgatgtcccctctcca
ctgcttcagcttttgtcttttgaaaaattgatagacgatgaaaatgacaatgcccgatat
aaggttgttttgtctgatgccacacacacgcaattggcgatcctcccacctaagtatagt
ggtttgctgctttcagagacattaaagattggcactatcctatcattgacagcctatgct
tgtagaaatgtttggaactcaaggactataataatattcagccttgctgtcaaatttacc
aattctccattgcttgggaaacctagatatctgtttaaagagcaagaacaacaaatgttg
ggtcgagacacacctgccacaactaaacgatcccttaaatttggaattcacctcccacct
gtgcagcacgaatcttctgttaatatcagcccgattaaagccttgaaccccttccaaaat
aaatggacaataaaggggcgtgtgacaaacaagaggaagatgcatcaatacagtacacca
aagtccactggccaagtatttagctttgacatgatagatagtgaaggtactgaaattagg
ataacttgctttggcgatgtagcagaaatgcattatcatagggttgaaccaggaacatat
tatactgtgtcaaaaggttgcgttaaagaagctaacactaaatggaataagcttaacagc
catcttgagataactttggacaacaattcaatattgaagcgttgtgatgatgttgttgaa
tgtgaagcaaataattctcaattcacaccaatcaatgaaattacatactgcaccaacaac
actttagttgatgttattggtattgtagttgctgttggagaaccctcattaattcgcagg
aaggatggaagcgaagtaacaaagagaattgcaaaaataaatgatgcctcagcttttact
atcgatgttaacttatggggagaaacatggcaagggctaggtgaagatttgaagagcatg
cacacaacccaaacagctattgtccttgcagtcagaaatgctcgtgttggttatttcaat
ggaaaggtggtcaacacaaccatagcaacaaccctaaatataaacccttctatacctgaa
acagagacacttatgtcaagaggaaagatttcagatgcccttttaccgctatcatgtgtt
gctggccagcttaactcacaatacagtaggatgacaatcacagctgttttagagcgtaca
agtgttctctctgaaacagttgaaagtactattagggctgttgtgagaatcattaaaact
gattctttttgctatccagcctgccctttgaaatttaatggaaaagaatgtaaaaagaaa
tgcacccagcaaagtgataatcaatggttttgttcaagatgtcaaactgctgtgccagaa
tgcaattacaaatacttattgcagatgaagctccaagatcatacaggggctctttgggct
actgcctttgatgaggttggcacaaatatactgcaaatatctgccaaggagctttacatg
ctgcagtacgatttgactacacaaaaaatgcctcagtccattatcaagcatgtccttttg
tcttcctttgttttcacactctctattacaacagacatgtacaatgcagaacccaggctc
aaagcaacgataaccaaagttgccagaattgattaccaggctgaaaatgctcttttgctt
gcagagattgctcagatgactacaactgcatag
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