Cryptomeria japonica (Japanese cedar): 131060014
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Entry
131060014 CDS
T10556
Name
(RefSeq) peroxisome biogenesis factor 10 isoform X1
KO
K13346
peroxin-10
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131060014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131060014
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
131060014
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
Prok-RING_4
Aa_trans
Motif
Other DBs
NCBI-GeneID:
131060014
NCBI-ProteinID:
XP_057849088
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Position
8:247913922..248042598
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AA seq
410 aa
AA seq
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MSFSHPCADLLVMANMAGERQRQEDAGSDDVGPRAKAVMKQFSPAAQAEMMRAAEKDDHY
ASYVYNACHDAFRHLFGTRLAVAYQNEIKLAGQMLYYLLTTGSGLQTLGEEYCDLCQVTS
SSGVPPTPARRILFIFFQSALPYLAERLSARVATHGVLLANRDPDESHARFGVGSGGATD
SVSDHASDLLSSSADRESAAIRCSRWKERVKKMWITAVQKWPLILPSVREASQLVIRTNL
MLFYFEGLYYHIAKRAAGIRYVFIGRPLPQKHRYQILGIFLFIQLCIIAGDWLRQSSLSS
LTNAMRSHSMGNELTRAGKGPPVLSEDGNFISDTLTETAASSSFSKSFETGVLSKCPLCL
SPRQNPTATPCGHVFCWNCVTEWCNEKPECPLCRSSVSHSDLVCIYHADF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttcacacccatgtgcagatttgttagttatggctaacatggctggagaaaga
caaagacaagaagatgctggaagtgacgacgttgggccaagggcaaaggcagttatgaag
cagttttctccggcagcccaagcagaaatgatgcgagcagcggaaaaggatgatcactat
gcatcttatgtttataatgcttgccatgatgcatttcgccatctctttggcacaaggctt
gctgtggcctaccagaatgagataaaacttgcaggacagatgctttattatttgctgaca
acaggatcaggtctacaaacattgggagaagaatattgtgatttatgccaggttacaagt
tcatctggagttcctccaacaccagccaggcggattctttttattttctttcagtcagct
cttccttatcttgctgaaaggcttagtgctagggtggctacacatggagttttgctggcc
aacagagatcctgatgagtcacatgctagatttggagttggaagtggtggtgcaactgac
agtgtttctgatcatgcaagtgacttattgtcctcttctgcagatagagaatctgctgcc
ataagatgctcaagatggaaagaaagagttaagaaaatgtggataactgcagttcaaaaa
tggcctttgattctaccatctgtacgggaggcttcacagctagtcatccgcacaaacctg
atgctcttttattttgagggtctttactatcatatagcaaaacgtgcagcagggattcgt
tatgtattcattggaaggccattgcctcagaaacataggtatcagattttgggcatattt
ctcttcattcagctttgcataattgctggtgactggttacgccaaagcagtttgtcttct
cttaccaatgccatgcgctcacattcaatgggaaatgaactcacaagagcaggaaaaggc
cctccagttttgagtgaagatgggaacttcatttctgatactcttacagagacagcagct
tcatcatcattctcaaaatcctttgagacaggggttttgagtaagtgcccactatgcctt
agtccccgccaaaatcctacagctacaccatgtggtcacgtcttttgttggaattgcgtc
actgaatggtgcaatgagaagccagagtgtcctctctgtcgttcttctgtgtcacattca
gatttggtgtgcatatatcatgcagacttctag
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