Cryptomeria japonica (Japanese cedar): 131060374
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Entry
131060374 CDS
T10556
Name
(RefSeq) lariat debranching enzyme isoform X1
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjf03041
]
131060374
03009 Ribosome biogenesis [BR:
cjf03009
]
131060374
Spliceosome [BR:
cjf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131060374
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
90S particles
RNase
131060374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
131060374
NCBI-ProteinID:
XP_059075890
LinkDB
All DBs
Position
4:495001344..495106753
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AA seq
427 aa
AA seq
DB search
MKIAVEGCAHGDLDNIYASLQHLEESENIKIDLLICCGDFQAVRNENDLESMACPVKYRT
MNTFWKYYSGEEVAPVPTLFVGGNHEASNYLWELYYGGWVAPKIFFMGFAGVIKFGSVRI
GGLSGIFNARDYYSGHYERAPYNNSDIRSIYHVREYDVHKLKQVEEPLDIFISHDWPRGI
TAFGNSEQLLRHKPFFESEIKDGTLGSRAAEELLKKLKPSYWFSAHLHTKFAALVQHGEN
GPVTKFLALDKCLPGRNFLQVIEIKSDAGPHEIHYDEEWLAITRAYNPVFPLSRKPARLM
PELPDLKGHRQWVQRHLEVHMKPFDFRPTVPAYDPTQRQPISVGHVRNPQTEALLQLLEL
SYVLDSSLESGTQKSSPISSMMSVKDPSEIILDDADDDSLPDDVDEIEASSEDTVDPNDV
ALEEDLS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcagttgaaggatgtgcccatggagatcttgacaacatatatgcctcattg
cagcacttggaagaatcagaaaatataaagattgatcttcttatctgttgtggtgacttt
caggctgtaagaaatgaaaatgatctggaatcaatggcttgcccagtcaaatatagaact
atgaatactttttggaagtattattcaggagaagaagtagcaccggttccaaccttattt
gtaggaggaaatcatgaagcatcaaattatctgtgggaactgtactatggtggatgggtt
gcaccaaagatattctttatgggttttgctggagtcatcaagtttgggagtgtccgtata
ggtggcctttctggcattttcaatgcacgtgattattattcagggcattatgaaagagca
ccttacaataatagtgatatcaggtctatttatcatgtacgtgaatatgatgttcacaaa
cttaagcaggttgaggagcctctggacatttttatttcgcatgattggcctcgcggtata
actgcttttggaaattcagagcaactgcttcgtcataagcccttttttgaatccgagata
aaagatggcacccttggaagtagggctgctgaggaacttttgaaaaagctaaaaccttca
tattggttctccgcacacctgcacaccaagtttgcagctcttgttcaacatggggagaat
ggacctgtcacaaagttccttgcattggataagtgtcttccagggcgtaactttttgcag
gttatagaaatcaaatctgatgcaggtccccatgagatccattatgatgaagaatggctt
gcaatcacacgagcatacaatcctgtttttccattgagcagaaaacctgcacggttaatg
ccagaacttccagatctgaaaggtcatcgccaatgggtacagaggcatttggaagtacat
atgaagccctttgatttcagaccaactgtcccagcatatgatcctactcaaagacagcca
ataagtgttggtcatgtaagaaacccacaaacagaagcacttttacaattgctggagtta
tcttatgttctagattcctcactggagtcagggacccaaaagagcagcccaatttcttct
atgatgagtgtgaaggatccaagtgaaattattctagatgatgccgatgatgacagtttg
cctgatgatgttgatgagattgaagctagttcggaggacacagttgatccaaatgatgta
gctcttgaagaagatttatcttga
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