Cryptomeria japonica (Japanese cedar): 131060649
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Entry
131060649 CDS
T10556
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131060649
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjf02000
]
131060649
Transporters [BR:
cjf02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
131060649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_25
ABC2_membrane_3
RsgA_GTPase
AAA_33
AAA_28
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
131060649
NCBI-ProteinID:
XP_057849947
LinkDB
All DBs
Position
5:complement(445198233..445205029)
Genome browser
AA seq
1467 aa
AA seq
DB search
MSLKLDGNSEVQSWAGSLRLGSRRLFDRSETVFSASSASRNRLDDEDSLKWAAIEKLPTY
DRLRTSILKDIHGEVDVTDIQLDSRQKVLDRLVKVAEEDNERFLHRQRRRIDRVGIQLPE
VEIRYEHLNVDANAHVGGRALPTLLNYTLDILEGLLGSLGLYKGNKTTMTILHDVSGVVK
PGRLTLLLGPPASGKSTLLLALAGRLDKSLRVTGSVKYNGHSMDEFVPERTSAYISQHDL
HTGELTVRETLDFGARFQGVGSRYDILTELSRREKEQGIKPDPDIDLFMKATSIDGQKTS
MMTDYILKILGLDICADTIVGDQMHRGVSGGQKKRVTTGEMIVGAANALLMDEISTGLDS
STTFQIVKCLRQYVHVFNSTMVISLLQPAPETFDLFDDVILLSEGYLVYSGPRESILEFF
ESMGFRCPERKGVADFLQEVTSPMDQEQYWANRGRAYRYVPVKEFADAFQSFHVGAKMNV
ELSVPYDKTKSHPAALTKHKYGVSKMELFRACLDREILLMKRGVFVHIFKSAQITLIALI
TMSVFFRTNMHHRNLNDGTIYFGALFFGLTQLMFNGFAELSMTIDKLPVFYKQRSLKFFP
AWAFSLPTWVTTIPSSILESVIWTVVTYYTIGFTPSPHRFFRQWLLLFALSQTSLSLFRF
IASLGRNRVVAMTFGTFALLVIFVLGGFIVSREDIKGWWIWGYWISPLMYAQNGIAVNEF
LASRWQKETENVGVKLLHSRGLFSDNWWYWLSVGALFGYAVLFNVLYTVALHYLEPLGKP
QATISEDDLKHKENSTVGLQNRAFHENGVEMQNIQQGGIREVQSVGGRSSQRHRSSSVSN
RSDSLVTSAREAGKKGMVLPFQPLSMAFDHVSYFVDMPEEMKQQGVTEDRLQLLREVSGT
FRPGVLTCLMGVSGAGKTTLMDVLAGRKTGGYIEGSVTISGYPKKQETFARISGYCEQND
IHSPCVTVYESLIYSAWLRLPKEVDRKTREMFVEEVMSLVELENLKGALVGLPGMRGLST
EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSID
IFEAFDELVLMKRGGQMIYVGPLGHRSKDLIDYFEAVEGVPKITQGYNPATWMLESSSVG
TELRLGVDFAEIYRNSRLYERNDALIKELSVPAPGSNDIYFESQYSQSFFIQTCACLWKQ
HWSYWRNPEYNAMRFFFTLIVALICGTIFWRMGSKTGEQKNVTNAMGSMFASVMFLGVNN
ASSVEPVVDVERTVFYREKAAGMYSALPYAFAQVLIEIPYIFIQAVAYGLIVYAMIDYKW
EAAKFFWFFFFMFFTFLYFTFYGMMTTSLTPNANVAAIVSSAFYGVWMLFCGFIIPRNKI
PVWWRWYYWGDPVSWTLYGLVASQFGDLENIITKTDGTTEILKDFLKNYFGFRHSFLGAT
AGIAAGWSVLFAFIFAFAIKYLNFQNR
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgaaattggatggcaatagcgaggtgcagtcatgggcaggcagcctgcgtctg
ggaagccggcggctattcgacagatctgagactgttttttctgcttcttccgcttcaaga
aaccgtctagatgatgaagactccctcaaatgggcagccatcgagaagctgcccacctac
gatcgcctcagaacttcaattctcaaggacattcatggtgaagtagatgttacagatatt
caactcgacagtcgacaaaaagtgctcgataggcttgtcaaagttgcagaggaggacaac
gaacgttttctccatcgccagcgtagaagaatcgacagagtcggcattcaattgcccgag
gtcgaaatccgttacgagcacttgaatgtcgacgccaatgcccatgtgggaggcagagca
ctacctacgctcctcaactataccctcgatatattggagggattgttgggatcgcttggt
ttatacaagggcaacaaaacaaccatgactattcttcacgatgtcagtggtgtggtgaag
cccggcaggcttacgctccttcttggacctcctgcttcgggcaagtctacgctcctcttg
gctcttgcaggaaggctggataaatctctcagagttacaggatcggtaaaatacaatggg
catagcatggatgagttcgtcccagagaggacatctgcttacattagtcagcacgatttg
cacacaggggagctgactgtaagggaaaccttggacttcggtgctcgctttcagggcgtt
ggctccagatatgatattttgactgagctttccaggcgagagaaagaacagggtatcaaa
ccagatccggacatagatctcttcatgaaggcaacttcaatagatggacagaagacgagt
atgatgacagactacatcttgaagatattggggttggacatctgcgcagacacgattgta
ggggatcaaatgcacagaggtgtttcaggtgggcaaaagaagagagttacaactggagag
atgatcgtgggagctgcaaacgcgctgttgatggacgagatttcaaccggccttgacagc
tctaccacatttcagatagttaaatgcctgcgtcaatacgtgcacgtcttcaattcaacc
atggtcatttcgcttttgcaacctgcccccgaaacatttgatctctttgacgatgtcatt
ttactttccgaaggctatctcgtctacagcggaccccgtgaatccattcttgaattcttc
gagtccatgggatttagatgccctgaaaggaaaggtgttgctgattttttgcaggaggtg
acttcgcccatggatcaagaacaatattgggcgaacagaggtcgagcgtaccgttatgtg
ccagtgaaggagtttgcagacgcattccaatctttccacgttggagccaaaatgaatgta
gagctatcagttccctatgataaaaccaaatctcatccggctgcgctgaccaaacacaaa
tatggtgtaagtaaaatggagcttttcagagcatgtttggacagagaaattttgttgatg
aagaggggtgtctttgtccacatcttcaaatccgctcagatcactctaatcgctttgatt
acgatgagcgtcttcttccgaaccaatatgcatcacagaaatctgaatgatggaacaatc
tacttcggagctctcttctttgggctaacacagctcatgttcaatggttttgcggaacta
tcaatgacaattgacaaactcccagtattttacaagcagaggagtttaaagttctttcct
gcttgggctttctctcttccaacctgggttaccacgattccttcttccatactcgaatct
gtgatatggacggttgtcacatactataccattggttttaccccaagtcctcacaggttt
ttccgacagtggttgctgttgttcgcactttctcaaacttcactatcacttttcagattc
atagcatctctaggacgaaatcgagtagtggcaatgacttttggtacttttgccctcttg
gttattttcgttcttgggggattcatcgtctccagagaggatattaaaggttggtggata
tggggttattggatttctcctctcatgtatgctcagaatggaattgcagtaaacgagttc
ctagcaagtagatggcaaaaggaaacggaaaatgttggtgtgaagttgttgcattctcgt
ggactgttttcagataactggtggtattggctttctgttggggcgctcttcggatacgct
gttctctttaacgtgctctacacagtggcattacattatcttgaacccctgggaaagcca
caagcaacaatctctgaagatgacttgaaacataaagaaaattcaacagttggtttgcaa
aatagagccttccatgagaatggggtcgaaatgcaaaacattcaacaaggcggtatcaga
gaagttcaatctgttggggggagaagttctcaacgacatagaagtagcagtgtttcgaat
aggtccgattcccttgtgacaagtgctcgtgaggctggcaagaaagggatggttttgccc
ttccaacctctctccatggcttttgaccatgtcagttactttgtcgacatgcccgaggaa
atgaaacaacaaggagtaacagaggaccgacttcagttactgcgtgaagtgagtgggaca
ttcaggccaggtgtgttgacatgtttgatgggggtgagtggggcagggaagacgaccttg
atggatgttcttgctggaagaaaaacagggggatatattgaaggttctgtcaccatatct
ggttatcccaagaaacaagagacctttgctcgcatttccggttactgcgaacaaaatgat
atacactctccatgtgtcacagtctatgaatccctcatatactctgcttggcttcgtctt
cccaaagaagtcgatcgtaaaactagagagatgtttgtggaagaagttatgagtctggta
gagctagaaaacttgaaaggagctctcgtgggtcttcctggaatgagagggttgtctact
gaacagagaaagaggttgacaattgcggtggaattggtagcaaatccatccattatattc
atggatgagccaacgtcagggctggatgctagagctgctgcaattgttatgcgaactgtt
cgaaatactgtggacacaggacgaactgttgtgtgcaccattcatcaaccaagcatagac
atattcgaggcctttgatgagctggtgctgatgaagcgtggagggcaaatgatatatgta
ggacctctaggtcatcgttcaaaggacctaattgactattttgaggcagttgaaggagtt
ccgaaaataacccagggttacaatccagcaacatggatgttggagtcctcttctgttggg
actgagcttcgacttggagttgattttgcagaaatatatcgcaattcccgtttgtatgag
agaaatgatgctctgataaaggaattgagtgtaccagctccagggtcaaacgatatatac
tttgaatcacaatattcacaatctttcttcatccagacatgtgcttgcttatggaagcaa
cattggtcctattggagaaaccctgaatataatgcaatgcgcttctttttcacactcatc
gtcgctttgatttgtggcacaattttctggaggatgggtagtaagacaggagagcaaaaa
aatgttaccaatgcaatgggctcaatgtttgcatccgtaatgtttttgggtgtgaataat
gcatcatcagttgagcctgttgtggatgttgaaagaacagtgttctatagagaaaaggct
gcagggatgtattcggctctcccatatgcttttgcacaagtgttgattgaaataccttac
atttttattcaagcggtagcgtatggattaattgtgtatgcaatgatcgactacaaatgg
gaggcagcaaagttcttctggttcttcttcttcatgttcttcacatttctatacttcaca
ttttatggcatgatgactacctctctcactcccaatgcaaatgtagctgcaattgtatct
tcagctttttatggagtatggatgcttttttgtggctttataattccacgaaataaaatt
ccagtgtggtggagatggtactactggggagacccagtctcatggacactctatggattg
gttgcttcacaatttggagaccttgaaaacataataacaaaaactgatggcactacagaa
atactcaaggatttcttaaagaattactttggattcagacatagcttcctaggagctact
gcaggcattgcagctggatggagtgttctctttgccttcatctttgcctttgccatcaaa
tatcttaacttccaaaatagatag
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