Cryptomeria japonica (Japanese cedar): 131060734
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Entry
131060734 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131060734
KO
K12586
exosome complex component RRP43
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131060734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131060734
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131060734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
131060734
NCBI-ProteinID:
XP_057850075
LinkDB
All DBs
Position
10:561436733..561567938
Genome browser
AA seq
305 aa
AA seq
DB search
MGSSSEKAALVGDMDVEAFRRLYPLQFYERYLNESVRPDARPLGKARPTELNLGVVRTAD
GSAMAKIGKTTMLAGVKLEVMTPAAEAPDEGCIVTDFQMPPICSPHVRPGRSVDLAASVS
EQLSNAFASSGVIDVKELLISHGKAAWMAYLDIYCLDADGSLFDCALLSAIGALANLSLP
SVSVTEDGKVIPASGGTVQEVESNKHAKVQEQRQKLMLQNIPFSLTCMLYKKHLIADPTA
EEESILQTMVIVVLDSSGRLVSFYKPGGSTLASTSTVQDCIALTKYRVKELQRVLDEALS
EMEST
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtagcagcgagaaagctgctctggtgggggacatggacgtagaagcctttaga
aggctataccctctgcagttttatgagcgctacctcaatgagagtgttcgtcccgatgcc
aggccccttggaaaagctagacccacagaacttaatctaggagtggtgcgcactgcagat
ggctcagccatggctaaaattggcaagacaaccatgctggctggagtgaaactggaagtg
atgacacctgcagctgaggcccctgatgaaggttgcattgtgacggactttcaaatgcca
cctatttgttctccccatgttcgaccaggcagatcggtggacctagcagcttctgtttct
gaacagttgtcaaatgcctttgcaagttctggtgttattgacgtgaaggaactgctgata
tcacatggaaaagcagcttggatggcatatttggatatatattgcctagatgcagatggt
tcactttttgattgcgctttgctttcagctattggtgcccttgcaaacttgtcccttccg
tctgtttctgtgactgaagatggaaaagtgattcctgcatctggaggcactgttcaagaa
gttgaaagcaacaagcatgctaaagttcaagagcaaaggcagaagctgatgctacagaat
attcccttttctttgacttgtatgctctataagaaacatttaatagcagacccaacagca
gaagaagagtctattcttcaaacaatggttatagttgttcttgattcttctggtcgcctt
gtctccttttataaacctggtggttctactcttgcatctacttccactgtacaggattgc
attgcactaacaaagtacagagtcaaagagttgcagagagttcttgacgaagccctttct
gagatggagtctacttaa
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