Cryptomeria japonica (Japanese cedar): 131060941
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Entry
131060941 CDS
T10556
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
131060941
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cjf01001
]
131060941
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131060941
Enzymes [BR:
cjf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
131060941
Protein kinases [BR:
cjf01001
]
Serine/threonine kinases: Other
VPS15 family
131060941
Membrane trafficking [BR:
cjf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
131060941
Autophagy
Autophagosome formation proteins
PI3K complex
131060941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
HEAT
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
PK_Tyr_Ser-Thr
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
Cohesin_HEAT
TCAD9
NICE-3
APH
Motif
Other DBs
NCBI-GeneID:
131060941
NCBI-ProteinID:
XP_057850385
LinkDB
All DBs
Position
5:523643280..523697722
Genome browser
AA seq
1625 aa
AA seq
DB search
MGNKIARTTQASASEYYLHELPSSLNLVLKEVVGRGRFLKSIQCMHDEGLLLVKVYFKRG
GDSLHLKEYERRLCEIKERLQKIKDSHVWPFQCWLETEKAAYLIRQYFFSNLHDRLSTRP
FLNNIEKKWIAFQLLYALKQSHEHGVCHGDIKCENVLLTSWNWVYLADYASFKPTYIPDD
DPSDFSFFFDTGGRRRCYLAPERFHEPGGDGQLNVDTTLKPSMDIFSLGCVIAELFLEGQ
SLFELSQLLAYRRGQYDPGPYLEKISDDGIRSMILHMIQLDPEARLSCDSYLQNYAYVVF
PSNFPFFHNLFSWITPLDTDKRVAVIQSAFPEILKQMAPTFSEGNNALNKASSTDANQIA
MSAGSSPSIGVQENLKGCFDKNEQSGKINVGSSYSGLISDIGTLQRDLLQPNCEKHTSEK
AQMDYLGNSFMKKNEDREIRSSHEMRKYSDSLQLNANRNVIKKYLFSERKENKDPVTSGV
GTEKNAHSVLVHSDRVETGTKCDGMVLIASLLCACVRSGTLTQSRRGAILLLLRSSYYID
DEDRLQHVLPYVIAMLSDPAAIVRCAALQTVCDVLSLVNEFPPSDAKIFPEYILPMLSTL
PDDPEESVRICYANNIYKIAATASHFLIRSQVLNEADILDRSNISHKAGKGPLGSQASDH
RKNSKCNAELTELRQTIAHVIQELVMGPKQSPIIRRALLEHIKELCDFFGKKQTNDFLLP
ILPAFLNDRDEQLRAVFFEQIIHVCYFVGQISVEQYLFPYIEQALNDVVEEVIVNALKCL
AALSKSKLLGKLLVIGSVEHSAPLLCHPSQWVRRAAVIFIAAGSESLQPVNSYVYLSPIL
LPFLRREPASLTSEIELLSCLKSPMSRKTFHEVLEKAKNSQCLEVSEKGNNQSKVKQLPD
SQKLVEPSLNSNNAPFLNKKIHEKISSISSVAVDPAVAKSWLINKSYLHPNIESFGQNIS
LSEPEDCARMKAMESYILNLSSTMQSRENTSELENHEKLQASGLGMPVNSGTGNGSNHGP
SYDGVPIYVYPLNEMKNESGKSLMSSIGSSLNEELSKDVVGPQGATPILMTNFSGAQVAG
SVVSSQWTLGAGHSSMPAAEMIQKSVSMVGSFPPKLVSGSILNGSFASTRQANKVLRDSA
GRENDDITYMMNKFKDIAISDDSKSSLLSMSVTAGSPSLTDATVMSSYSGSSVPDRAWRP
RGILVAHLQEHQLAVNDIAVSHDHNFFVSASDDCTVKIWDSRRLEKDITFRSRLTYSVGD
GRALHVAMFANGPQVAVASSSGRIHVFSVNYLLREDGSIDRYTGTENVAKKETKEGAVLS
LQKFSTEGPPMILYSTQHNGIHLWDLRAQINAWTLKASPKEGYISAVVVDPFQSWLVSGS
SRGVLTLWDVRFHIPVNTWQHPMACSIEKMCLHAATSNSFPCTTGDPLVYVAAGINEVAL
WNAKDGSCQKVFRLPCSEAVADVSEIPAALARSSQSTLKSGVALRSKRMANSKYGVDELN
EPPPRLPGIRSLLPLSGGDLLTGGTDLRIRLWNHFRPERSYCVCGPPIKKTAGEEYYDTR
SVHGVQVVQETNRHSIKLTSKASLAAAATDSAGCHRDSILSMASIQLNQKFLISSSRDGA
VKVWK
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagattgcgcgtacgacgcaggcatcagcgtcggagtattacctgcacgag
cttccttcgtcgttaaatttagtgttaaaggaagtcgtggggaggggcagatttctgaag
tccattcagtgcatgcacgatgaaggcctcttgctggtcaaagtctattttaagcgcggc
ggcgattccctccatctcaaggaatatgaaagaaggttgtgtgagataaaggagaggctt
caaaagattaaagactctcatgtttggccatttcaatgttggcttgagactgagaaagca
gcataccttattcgccaatatttcttcagcaatttgcatgatcgattaagcacccggcca
tttctgaacaatattgaaaagaagtggatcgcctttcagctgctgtatgctttgaagcag
agtcacgagcatggggtctgtcatggtgatataaagtgtgagaatgtacttttgacctct
tggaattgggtgtaccttgcggattatgcatcgttcaagccaacatatatacctgatgat
gacccatcagatttctcctttttctttgacactgggggaagacgacgttgttatcttgca
cctgagcgttttcacgagccaggaggtgatggtcaacttaatgtggatactactttgaag
ccatcaatggacatcttttccctggggtgtgttattgctgagctttttcttgaggggcag
tcattatttgaactatcgcagctgcttgcttaccgaagaggacagtatgaccctggacca
tacctggagaagatatctgatgatggaatccgcagtatgattttacatatgatccaattg
gatccagaggcacgtctgtcatgtgacagttacttgcaaaactatgcatatgttgttttt
ccaagcaattttccctttttccacaaccttttttcttggataacacctctggacactgat
aaaagggttgcagtcatacaaagtgcatttcctgaaattctcaagcaaatggcaccaact
ttttcagagggaaacaatgcactgaataaagcatcaagcactgatgccaatcagattgct
atgtcagctggttccagtccgagcattggagtacaggagaatttaaaaggttgctttgac
aagaatgaacaatctggaaaaattaatgttggaagttcatattcagggttgattagtgat
attggtactctccaaagagacttgttgcaaccgaattgtgaaaaacacacaagtgaaaaa
gctcagatggattatcttggaaattcttttatgaagaagaatgaggatcgggaaattaga
tccagtcatgaaatgaggaagtactctgattctttgcaattaaatgctaatagaaatgtg
ataaaaaagtacttattttctgaaagaaaagagaataaagatccagtcacttcaggggtt
gggacagaaaaaaatgcgcactcagttcttgtacactcagatagagtggagactggcaca
aagtgtgatggaatggtgttaattgcatcattgttatgtgcatgtgttcgaagtggtaca
cttacacagtcaaggagaggagctatattgttattgctacgctcttcatattatattgat
gacgaggatcggttgcagcatgttcttccttatgttattgcaatgctttctgatccagct
gctattgtacggtgtgctgctttgcaaactgtctgcgatgtactttcattagtcaatgaa
tttcccccaagtgatgcaaaaatatttccagaatatattcttcctatgctttcaacatta
ccagatgatcctgaggagagtgttcgtatttgttatgctaataatatatacaagattgct
gcaaccgcctcacactttcttatacgctctcaagttttgaacgaggcagacattttagat
agatcaaatatttcacataaggctggcaaaggtcctttgggttcacaagcttcagatcat
cgaaagaacagtaaatgtaatgcagaacttacagagttacggcagacaatagctcatgtt
atacaagaattggtaatgggaccaaagcaaagtccaataataaggagggcactgctagag
cacataaaggaattgtgtgatttctttgggaagaagcaaactaatgacttcttgttgcct
attctcccagcttttctaaatgatcgtgatgaacagttacgagctgtattctttgaacag
attatccatgtatgttattttgttggtcaaataagtgtggagcagtatctttttccttat
attgagcaggctctaaatgatgtcgtggaagaagttattgtgaatgccttgaaatgtttg
gcagcgttgtcaaaaagtaaattactaggaaaattgttagtgattggatcagttgagcat
tctgctccacttttgtgtcatcctagccaatgggttagaagggcagctgtcatttttatt
gctgcaggtagtgagagtttacagccagttaattcttatgtttacctttcaccaattctt
cttcctttccttcgtagagagccagcatctttaacttcagagattgagttattgtcatgt
ctaaagtctccaatgtcaagaaagacttttcatgaagtcctagaaaaagccaagaattca
caatgtttagaggtttcagaaaagggcaacaatcagagcaaagttaagcaacttccagat
tctcagaagctagttgaacctagtttaaactcaaataatgctccttttttaaataaaaaa
atacatgaaaagatttcatctatttcgtctgtagcagttgatccagctgtggccaaaagc
tggttaattaataagtcatatctacatccaaacatagaatcttttggccagaatataagt
ttatctgagccagaagattgtgcaaggatgaaagcaatggaaagctacattctaaatctg
tccagtacaatgcagtctcgagagaacacttcagagttggaaaatcatgagaagcttcaa
gcttctggtctaggaatgcctgtgaattctgggacaggtaatggttccaaccatggccca
tcttatgatggtgtcccaatatatgtgtacccccttaatgaaatgaaaaatgaaagcgga
aaaagtctgatgtcatcgataggatcatccttgaatgaagagttaagcaaggatgttgta
ggtccacaaggtgcaacgcctattttgatgacaaatttttctggagcacaagttgctggt
tctgttgtttcctcacagtggactttgggtgctggtcactcgtccatgcctgctgcagag
atgatacagaaatctgttagtatggtaggttcttttcctcccaagttggttagtggttct
attttgaatggcagctttgcttctaccagacaagcgaataaagtcctgagagattctgct
ggaagagaaaatgatgacataacttacatgatgaataagttcaaagatatagccatttcc
gatgattctaagagctctttattgtcgatgagtgtaactgcgggttctccatcactaaca
gacgcaactgtaatgtcatcttactctggatcatctgtcccagatcgggcatggcggcca
cgtggaattctggtggcacatcttcaagagcatcaattagctgtcaatgacattgcagtt
tcacatgatcataacttttttgtaagcgcatcagatgattgtacagttaagatctgggat
agccgaagactagaaaaagacattacatttcggtcaaggttgacctactctgtaggtgat
ggccgagcacttcatgttgccatgtttgcaaatgggccgcaagttgctgtggcatcaagt
agtggcagaatacatgttttttctgtgaattatcttttaagagaagatggcagcattgat
aggtacactggcactgaaaatgttgcaaagaaagagacaaaggaaggagcagttctaagt
ttgcaaaagttttctacagaaggtcctccaatgattctttacagcacccaacataatggt
attcatctttgggacttaagggcacagatcaatgcatggacattgaaagcaagtccaaaa
gagggttacatttctgcagttgtggtggatccatttcagagttggcttgtttcaggttca
tctagaggggtgctaaccctatgggatgtgcggtttcatatccctgtaaatacatggcag
catcctatggcttgctctatagagaaaatgtgtcttcatgccgcaacttcaaattctttc
ccatgtacaacaggtgatccactggtttatgtagctgcagggatcaatgaggtggctctg
tggaatgcaaaggatggtagctgtcagaaggtctttcgactgccatgctctgaagctgtt
gcagatgtttctgagattcctgctgcattagccaggtcaagtcaatcgactctgaagtct
ggagtcgcccttcgctctaaaagaatggcaaattcaaaatatggagtggatgagttgaat
gaaccaccacctcgacttcctggtatccgctcattgctcccattgtcaggtggcgatttg
ttaactggaggaacagatttgaggatacgactttggaaccacttcagacctgaacgcagc
tattgtgtctgtggacctccaataaagaagacagctggggaagaatattatgatacaagg
tccgttcatggggtacaggttgtgcaggaaacaaacaggcattccatcaagttgacatca
aaggcgtcccttgctgcagctgcaactgattctgcaggttgtcaccgtgattccattcta
tcaatggcatcaatccagctaaatcagaagtttttgatttccagcagtcgtgatggtgca
gtcaaagtttggaaataa
DBGET
integrated database retrieval system
