Cryptomeria japonica (Japanese cedar): 131061003
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Entry
131061003 CDS
T10556
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjf03041
]
131061003
Spliceosome [BR:
cjf03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
131061003
Other components
Complex C specific factors
131061003
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Mis12
Motif
Other DBs
NCBI-GeneID:
131061003
NCBI-ProteinID:
XP_057850487
LinkDB
All DBs
Position
9:545747211..545750502
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AA seq
849 aa
AA seq
DB search
MDEYQHMERFGVENDYVDGQWIGGEFYYRKRKEKRSQTKDDVLYGVFDESDSDEEGSSKR
RRRDVIKKGDLTKPVNFVSTGTVMPSEEIDKKVEEKDEGMLGTSAGLGFKPNDKDDTREQ
DNFLPTAFGRIIKEGAERRERERDRDRSKGSIGKGKESAGVGNGMIGTFEKHTKGIGMKL
LEKMGYKGGGLGKNEQGIALPIEAKLRPKNMGMGFNDFNEVSTGLPSLPAMEEKGEEKVN
EVKPRTKEKLWSKQNQSRKKEYITAEELLAQKQEQGVEVVQKVLDMRGPQVRVLTNLENL
NAEKKAIEHQTPMPELQHNVKLILDMVEADIQKFDQNLRHERESVAIYQKEKERLQKESA
RQKKQLENIEDIKGALDRIEESVAVGTMTLELLASVFENLQSKYREDYTMCNLSCIASSF
ALPLLIRVFQGWEPLQHPSHGLEVMSLWQRLLQGDEPRDYGIYTETELASSTPYTQLFTE
VILPAVRIAATNSWEPRDPEPMLRFLETWEKLLPASVLYNILDHIVMPKLTAAVDTWDPR
RETVPIHAWLHPWLPLLGQRMEPLYPTIRYKLGNVLHAWHASDASAYAILSPWKTVFDPA
SWEQLIVRFIVPNLMTVLQEFVINPADQQLDQFNWVMAWASAIPIFHMVAMLEAGFFPKW
QQVLYHWLCSNPDFNEVTQWFLGWKGLFRPELLANERIRSQLNVALEMMNQAVEGMTVEQ
PGARENVSYLRVTEQRQFEALQQQQAAAAYAQQQASTSLGSGIHLNNSMGAPQLSLKEVI
ETYAQEHDIQFFPKVGRTHDGLQVYGFGSVSIYLDSAKQQVLAQSGDRWVIASLEQLVEM
HRNRTGGNH
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatatcagcatatggaaagatttggcgtggagaatgattatgtggacggacag
tggattggaggggaattttattacaggaagcgaaaagaaaaacgctctcagactaaggac
gatgtgctctatggtgtatttgatgagagcgattccgacgaggagggctcatcgaaaagg
aggagaagggatgtcattaaaaagggggatttgactaagcctgtcaattttgtgtcaact
ggcaccgttatgccttctgaggaaattgataagaaggtggaagaaaaagacgaggggatg
cttggtaccagtgcagggttagggtttaagccgaatgacaaggatgatacccgagagcag
gataattttcttccgactgcttttggtaggataatcaaggaaggagcagagagaagagaa
agagaaagggacagagatagatcgaagggctcaatagggaaaggaaaggagagcgctggt
gtgggaaatggcatgattggcacttttgagaagcataccaagggtattggaatgaaattg
ttggagaagatgggttacaagggtggaggtctaggaaagaatgaacaggggattgcactt
cctatagaggcaaaacttaggccaaagaacatgggtatgggtttcaatgatttcaatgaa
gtatccactggtttgccttcattgcccgcgatggaggaaaagggggaagagaaggtgaat
gaggttaagcctcggacgaaagagaagctgtggtccaagcaaaaccaaagtaggaagaaa
gaatacataacagctgaagaacttttagctcagaagcaggaacagggtgttgaagtagtg
cagaaagtgcttgacatgagaggtcctcaagtgagggtgttgacgaatcttgaaaacttg
aatgctgaaaagaaggctatcgagcatcaaacacctatgccagagttacaacacaatgtg
aagttgattttagatatggtagaggcagatattcagaagtttgatcagaatttaaggcat
gagagagagtctgtggcaatatatcagaaagagaaggagaggcttcagaaagagagtgca
cggcagaagaaacaactagagaacatagaggatattaagggagcattggatagaatcgag
gagagtgttgcggtaggtactatgacattggaattacttgcaagtgtctttgagaattta
cagtccaaatatcgggaggactacacgatgtgcaacttgtcatgtattgcatcttcattt
gctttgccattgctgataagagtgtttcaaggttgggaaccacttcagcatccttcgcat
ggtttagaggtaatgtcattgtggcagaggcttctgcaaggggatgagccccgtgattat
ggtatttacacagaaacagaacttgcttcttcaactccttacactcaactcttcactgaa
gttattcttccagcagtgagaatagctgctacaaattcctgggagcccagggaccctgaa
cctatgctacgttttctggaaacatgggagaagttactaccggcttcagttctttataac
attctggatcatatagtgatgcccaaattaacagcagcagtagatacttgggatcctcgc
agggagactgtgccaatacatgcatggttacatccttggcttccattgttgggccagcgt
atggagcctttatatccgaccattcgatataagctggggaatgtgcttcatgcctggcat
gcaagtgatgcatctgcatatgcaattttatcaccttggaaaactgtatttgatcctgct
agctgggagcagctgattgttcgttttattgtacctaatctgatgacagttctgcaggaa
ttcgtaatcaacccggctgatcagcaactagaccaattcaactgggttatggcttgggca
tctgctattccaatatttcatatggttgcaatgttggaggcaggtttttttccaaagtgg
cagcaagttttgtatcattggctatgttcaaatcctgattttaatgaagtaacacagtgg
tttttagggtggaaaggactctttcgccctgaacttcttgctaatgagaggatcagaagt
cagctaaatgtagcccttgaaatgatgaatcaagctgtagagggtatgactgtggaacaa
cctggggctagagagaatgtgagctatcttagggtgacagagcagcgtcagtttgaggca
cttcagcagcagcaagcagcagcagcatatgctcaacagcaagcctcaacttccctgggc
agtgggattcacctgaataattcgatgggtgcacctcaattgagtttgaaggaagtgatt
gaaacatatgctcaagaacatgacatccaattcttccctaaagtgggacgcacgcatgat
ggtcttcaggtttatggctttggatctgttagtatctatctagattctgcaaaacaacaa
gtgcttgcacaatctggagatagatgggtgattgcgtcattggagcagctagttgagatg
caccgcaatcgaactggaggaaatcattga
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