KEGG   Cryptomeria japonica (Japanese cedar): 131061163
Entry
131061163         CDS       T10556                                 
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
  KO
K07466  replication factor A1
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030  DNA replication
cjf03420  Nucleotide excision repair
cjf03430  Mismatch repair
cjf03440  Homologous recombination
cjf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131061163
   03420 Nucleotide excision repair
    131061163
   03430 Mismatch repair
    131061163
   03440 Homologous recombination
    131061163
   03460 Fanconi anemia pathway
    131061163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cjf03000]
    131061163
   03032 DNA replication proteins [BR:cjf03032]
    131061163
   03400 DNA repair and recombination proteins [BR:cjf03400]
    131061163
Transcription factors [BR:cjf03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    131061163
DNA replication proteins [BR:cjf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    131061163
DNA repair and recombination proteins [BR:cjf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     131061163
   MMR (mismatch excision repair)
     131061163
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     131061163
SSDB
Motif
Pfam: REPA_OB_2 tRNA_anti-codon TMEM219 DUF223
Other DBs
NCBI-GeneID: 131061163
NCBI-ProteinID: XP_057850678
LinkDB
Position
5:445781095..445800097
AA seq 345 aa
MKTVQDLCTHKQKKKMDPKIVKVIGQLVDVMLRNLTVPKYVDPGTPMIKVRIGNVVIPNT
LIDMGVIIKVMTIERKEKLSIKGLRPTPTVLQMADCSVVKPKEINPTNNPYDFPIVGRNE
ASKRIIPIAALNSYKTRWTIKARDTKKGQLHHFNNAREDGKVFSFDLVDFDGDEIRVTCF
NVIAKEFYDRIDIGRVFITSKERLKPTQNNFNHLNNEWEFILESNSEVEFCLEDNSLIPE
QIFHLTRISEIENMKSISMVDIIGVVLSIDPPNIIFKRDATRIKKINIQLKDMSTCMVEL
TMWGGFCNKEGQKLQEMCNLGTFPILAIEAAQIVILVENLLEQLP
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgaagacagttcaagatttgtgtactcataagcaaaagaaaaagatggatcccaagatt
gttaaagtcattggacaacttgttgatgttatgcttaggaacctaacagttcctaagtat
gttgatccaggaactcctatgataaaggtacgcattggtaatgttgttattcctaataca
ctcattgatatgggagttataattaaggttatgacaatcgaaagaaaggaaaaattatca
attaaaggacttagacccactcctacagttctccaaatggcagactgttctgtggtcaaa
cctaaagaaatcaatcctaccaacaatccatatgacttcccaattgttggaagaaatgaa
gcttccaaaagaattattcctattgcggcattaaattcgtacaaaactagatggacaata
aaggcaagagacactaaaaagggtcaacttcatcattttaacaatgcaagagaagatgga
aaagtttttagttttgacttggttgattttgatggtgatgaaataagagtaacatgtttt
aatgttattgcaaaagagttttatgatcgtatagacattgggagagtgtttataacctca
aaagagagacttaaacctacacaaaataatttcaaccatttaaataatgaatgggaattt
attttagaaagtaattctgaagttgagttttgtttagaggacaatagcttaataccagaa
caaatatttcatcttacaagaataagtgaaattgagaacatgaaaagcatttctatggtt
gacattattggtgttgttttatcaattgatccaccaaacataatattcaaaagggatgcc
acaaggattaagaaaataaatattcaactaaaagacatgtcaacttgtatggtggagtta
acaatgtggggtggtttctgcaataaggaaggccaaaaactccaagaaatgtgcaattta
ggaactttccccattcttgctatagaggctgcacaaatagtgattttggtggaaaatttg
ttggaacaattaccatga

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