Cryptomeria japonica (Japanese cedar): 131061265
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Entry
131061265 CDS
T10556
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131061265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjf03021
]
131061265
03036 Chromosome and associated proteins [BR:
cjf03036
]
131061265
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131061265
Coactivators
SAGA/TFTC/STAGA complex
131061265
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
131061265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
DUF7952
Motif
Other DBs
NCBI-GeneID:
131061265
NCBI-ProteinID:
XP_057850823
LinkDB
All DBs
Position
11:722036783..722125388
Genome browser
AA seq
720 aa
AA seq
DB search
MSQSQIQIESVRNREATQEFNLIAGAPGTFAQSNIPVIHLQESTSQFQLDDKDELQQPKQ
HIMHGRHQQHWDDHSSQQEQFEQNQSKRPEQRQQHVDEQRNSAESNSFALHLQQFTSQPQ
GENQRYRLKDNKHEQQQEQEKKLMEGELQQQQNQQEDHSNQQELFQQSQPQHVEQGQPHF
NEQSENLWLETLQVQQQQQKEEQEQHPHQEKQQYMQQSLQTHQQLQQLQLQPQVQQQQFN
QQSLQAVTSGQYTSRSITFSYLVETILPHLSREKAECVSAILLKFKRNEITKNDFVSGTR
KVVGDQILVQTVKQIQKKATLATSSTATLHHTLSAFGGPISGGHSSGDMLQEQMCIQMPS
APPSSAVGPEISTSEKVPLFGQNNCYESCPSNQPPRKKQKVSGDYLDQRVDPLNDITTIS
GVNLREEEEKLFAGPKDESCVAEAIRKVVQEEEERIFLQKGPLRAKIAGIMAKYGIKYLS
TDSERCLSLCIEEHLRTVIGQLIRLSKQRVDLERVSHKVVLTSDIQHQILAVNKKVKVDL
EKKQAEEEEKLQKLYGKSLTENNASTEGEKDESHAKIQRTYKEYDEMRSNAANAAVRAAI
GGDDMLLKWQRMAEQAQQKHKGTLYQASNTCTNRDVSRKNMVGRLEAGNEFDRLDAPSTG
IIQNLGREYPSSQCTQTEPVHTICVKDVIALLERKPHMTKSTLLYCLYERYEECNKEKPF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatcacaaattcaaattgagtcggtcagaaaccgggaagctacgcaagaattt
aatttaatcgcaggagccccaggaacctttgcacagtcaaacatacctgttatacatttg
caagaatcaacatctcaattccagctagatgacaaagatgaattgcagcagccaaaacaa
catattatgcacggaaggcatcagcagcattgggacgatcattcaagtcagcaagaacag
tttgagcaaaatcagtccaagcgtccagaacagcgtcagcaacatgttgatgagcagaga
aactctgcagagtcaaactcatttgctctacatttacaacaatttacttctcaaccgcaa
ggggaaaatcaaaggtatcggctgaaagataacaaacatgaacaacagcaggagcaggaa
aaaaaactaatggagggagagctgcaacagcagcaaaaccagcaggaggaccattcaaat
cagcaagaactgtttcaacaaagtcagccccagcatgtagagcagggtcaaccgcatttc
aatgagcagagtgagaatctgtggctggaaacccttcaggtacaacaacagcaacagaaa
gaagaacaagagcagcatccacatcaagagaagcaacaatatatgcagcagtccttgcaa
actcatcagcagttacaacagctacagctccagcctcaggtgcaacagcagcaatttaat
caacagtcactgcaggctgtcaccagtggacaatacacctctcgttctattactttttct
tatttggtagaaacgattttgccccatctttcaagagaaaaggcagaatgcgtttctgca
atattattgaagttcaaaaggaatgagataaccaagaacgattttgtaagtggtacaagg
aaagtggttggagatcaaatacttgtgcaaacggttaagcaaatccagaaaaaggcaacg
ttagcaacttcttcaactgcaacattgcatcacacattgtctgcatttggtggacctatt
tcaggtggtcattcctcaggggatatgttgcaggagcaaatgtgcattcagatgccttca
gcaccaccttcctcagcagttggtcctgagatcagtacatcagaaaaggtaccattgttt
ggacaaaacaattgttacgagtcatgtccttcaaatcaaccaccaaggaaaaaacaaaag
gtttctggagattacttagatcaacgtgttgacccacttaatgatattactactatcagt
ggagtgaacctaagggaagaggaagaaaagctttttgctggacctaaagatgaaagctgt
gtagcagaggcaataagaaaagttgtgcaagaagaggaggagagaatatttttacaaaag
ggaccactgcgtgcaaaaatagccggaatcatggcaaagtatggtatcaaatatcttagc
actgacagtgagcgctgcttgtcactgtgcattgaggaacatttacgaactgtgataggc
caattgatcagattgtctaaacagcgggttgatcttgagagggtcagccataaggttgtt
ttaacatcagatatacaacaccaaattctggcagtgaataaaaaagtaaaggtggatttg
gagaagaaacaggcagaagaggaagaaaaactacagaaattatatgggaaaagcttgaca
gagaacaatgctagtaccgagggagaaaaggatgaaagccatgcaaaaatacagaggaca
tataaagaatacgatgaaatgaggtcaaatgcagcaaatgctgcagtaagagctgcaatt
ggaggcgatgacatgttattgaaatggcaacggatggccgagcaagctcaacaaaagcac
aaaggtacattgtatcaagcatccaacacttgcactaatagagatgtaagtaggaaaaat
atggttggcaggttggaggcaggaaatgaatttgatcgtctagatgctccctcaactggg
ataatacaaaatttagggagagaatacccaagttcacagtgtactcagacagagcctgtc
catacaatatgtgtaaaagatgtaattgctttgctggagcggaagccgcacatgactaaa
tcgactttactttattgcttgtatgagagatatgaagaatgcaataaggaaaaaccattt
taa
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