Cryptomeria japonica (Japanese cedar): 131061273
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Entry
131061273 CDS
T10556
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131061273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjf03041
]
131061273
Spliceosome [BR:
cjf03041
]
Common components
Common spliceosomal components
SR proteins
131061273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_5
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
131061273
NCBI-ProteinID:
XP_057850839
LinkDB
All DBs
Position
11:721335839..721352810
Genome browser
AA seq
253 aa
AA seq
DB search
MRPIFVGNFEYDTRQSELERIFSRYGRVERVDMKSGFAFVYMDDERDADAAIRGLDSREF
GRQRRRLSVEWARGDRGIRHREGGVRAGNTKPTKTLFVINFDPYTTRVRDLERHFEPYGK
LMTVRIRRNFAFVQYETQEEATKALECTHMSKVFDRVISVEYAIRDDDDDDRFNQRESPQ
ERGIYGRRAERGSPGYGRPDSPIYGRRTGRMSPDYGRASSPVYDRYRGPVNDRDHSPVYG
RYRSRSPIRRSRT
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcggccaatttttgttggtaactttgagtatgatacacgtcagtcagagctagagcgc
attttctccagatatggcagagttgaacgggtagatatgaaatcaggttttgcttttgtc
tacatggatgatgagcgtgatgcagatgctgctattcgaggtcttgacagcagagaattt
ggtcggcaaaggcgtcggctctctgtggaatgggcaaggggagatcgtggaattcgacat
cgagagggtggtgtgcgagctggaaatacaaaacccacaaagacattgtttgtaatcaat
tttgatccctacaccacaagggttcgggatcttgagagacattttgagccatatggtaaa
ctgatgactgttcggatcagaaggaattttgcatttgtccaatatgaaacacaggaagaa
gcaacaaaggccttggagtgtacacacatgagcaaagtctttgaccgtgttatctctgtt
gagtatgctatacgtgatgatgacgatgatgacagatttaatcaacgggaaagcccacaa
gagcggggaatctatggaaggcgggcagagaggggaagtccaggctatggtcgacctgat
agtcctatatatggcaggcggacgggaaggatgagtcctgattatggaagggcttcaagc
cctgtttatgatagatatcgtggtcctgtgaatgatagggaccacagtcctgtttatggt
cgatatcgaagccgatcgccgataagacgctcaaggacctag
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