Cryptomeria japonica (Japanese cedar): 131061349
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Entry
131061349 CDS
T10556
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030
DNA replication
cjf03410
Base excision repair
cjf03420
Nucleotide excision repair
cjf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131061349
03410 Base excision repair
131061349
03420 Nucleotide excision repair
131061349
03430 Mismatch repair
131061349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjf03032
]
131061349
03036 Chromosome and associated proteins [BR:
cjf03036
]
131061349
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131061349
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
131061349
DNA Replication Termination Factors
ELG1-RFC complex
131061349
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
131061349
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
131061349
Check point factors
HRAD17(Rad24)-RFC complex
131061349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
Rad17
AAA_16
Mg_chelatase
Viral_helicase1
RCF1-5-like_lid
RuvB_N
AAA_5
AAA_11
AAA_24
nSTAND3
ABC_tran
AAA_19
AAA_assoc_2
AAA_25
DNAX_ATPase_lid
MeaB
AAA_30
AAA_7
AAA_28
bpMoxR
IstB_IS21
RNA_helicase
FtsK_SpoIIIE
NTPase_1
AAA_3
MipZ
AAA_18
ATPase_2
SRP54
UvrD-helicase
KTI12
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
131061349
NCBI-ProteinID:
XP_057850978
LinkDB
All DBs
Position
11:complement(707744515..707763062)
Genome browser
AA seq
332 aa
AA seq
DB search
MAGSSSSLTGNYDLPWVEKYRPTKVEEVVGNGDAISRLQVIAREGNMPNLILAGPPGTGK
TTSILALAHELLGSSYKEGVIELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDE
ADSMTSGAQQALRRTMEIFSNSTRFALACNTSAKIIEPIQSRCAIIRYSKLSDQEILHRL
MLVVEAEKVAYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQENVFKVCDQPHPLH
VKNMVQNILEGKFDEACSRLKGLYDLGYSATDIITTLFRVIKNYDMPEYLKLEFIRETGF
AHMRISDGVGSLLQLSGLLAKLSIVRDTAKAA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgggatcatcatcatcattgacaggtaactatgatctgccatgggtagaaaaatat
aggcctacaaaggttgaagaagttgtgggcaatggggatgctatttccaggcttcaagtt
attgccagggaaggcaatatgcctaatcttatcttagcgggtccccctggaacaggcaaa
acgacgagtatacttgctttggcacacgaactgctgggaagcagttacaaagagggagtt
attgaactcaacgcttctgatgacaggggtattgatgttgtgagaaacaaaataaaaatg
tttgcccagaagaaagtgacgcttcctccaggaaggcacaaaattataattctggatgag
gcagacagcatgacatctggagcacaacaagctcttagacgcaccatggaaatcttctca
aattcaacaagatttgctcttgcatgcaatacgtcagccaaaataattgagcccatacag
agcagatgtgctataatccgatactcaaagttatcagaccaagagatcctgcaccgtctt
atgcttgtggtggaagctgaaaaggtagcctatgtacccgaaggactggaagcaattata
ttcactgctgatggagacatgagacaagccttgaacaacttgcaagccacctacagtggc
tttcagtttgttaaccaagagaatgtgtttaaggtatgtgaccaacctcatcccttacat
gtcaaaaacatggtccagaatatattagaagggaaatttgatgaagcctgtagtcgttta
aagggtctctatgatcttggttattctgctactgacatcatcacaacactgttccgagtt
attaaaaattatgacatgccagagtatttgaagctggaattcataagggaaactggcttt
gcacatatgcggatatcagatggagtcggctcacttctccaattgtctggtcttcttgca
aagttgtccattgttagggatacagctaaagctgcataa
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integrated database retrieval system
