KEGG   Cryptomeria japonica (Japanese cedar): 131061453
Entry
131061453         CDS       T10556                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03020  RNA polymerase
cjf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131061453
  09124 Replication and repair
   03420 Nucleotide excision repair
    131061453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjf03021]
    131061453
   03400 DNA repair and recombination proteins [BR:cjf03400]
    131061453
Transcription machinery [BR:cjf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     131061453
  RNA polymerase III system
   RNA polymerase III
     131061453
  RNA polymerase I system
   RNA polymerase I
     131061453
DNA repair and recombination proteins [BR:cjf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      131061453
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 131061453
NCBI-ProteinID: XP_057851136
LinkDB
Position
2:complement(661862664..661879565)
AA seq 146 aa
MADEDYNDYEAADVGYEEEPVEPEIEEEVGAEEDVNDVPVDTLGGADKEPAGDDRPSGKP
RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL
PDGSYEDWGVDELIVEDSWKRQVGGD
NT seq 441 nt   +upstreamnt  +downstreamnt
atggcggacgaagattacaatgattacgaggcagcagatgttggatatgaagaagagcct
gttgagcctgaaattgaggaggaggttggagcagaggaagatgtaaatgatgtccctgtg
gacactttaggaggagctgataaagaacctgcaggggacgatcggcccagtggcaaacct
cggaaaacatcaaagtacatgactaaatatgaacgtgctagaatactcggcactcgagct
ttgcaaataagtatgaatgcacctgtcatggttgagcttgaaggagagactgatccactg
gagattgcaatgaaagaattacgtgagcgtaagattccttttacaatccgacgatatttg
cctgatggaagctatgaagattggggtgttgatgagcttattgttgaagattcatggaaa
cggcaagttggtggggactga

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