Cryptomeria japonica (Japanese cedar): 131061649
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Entry
131061649 CDS
T10556
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjf04040
]
131061649
Ion channels [BR:
cjf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
131061649
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
131061649
NCBI-ProteinID:
XP_057851421
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Position
7:complement(523796363..523891424)
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AA seq
733 aa
AA seq
DB search
MHISDTSRRFQVMGGQKERFVRFQSDSGSERSLEIDRGGLGEYVSSSDSFGRTPSSISSS
VRRGWEKGSQGLKNIGRSLRFGVSREVFSEDLKSSDKKIFDPQDKFLQKWNKIFVISCLA
AVSVDPLFFYLPVINNDSECLDIDDNIAIIATVLRTITDIFYLMHMALQFRTAFIAPSSR
VFGRGELVIDPIKIAKRYLSTYFIIDILAVLPLPQVVIWIIMPRMRGSAALNTKNSLRFI
VLLQYLPRFIRIFSLSKEVIRTAGVLTETAWAGAAYNLLLYMLASHVLGACWYFLALERR
DTCWREACSNNSNTCETRMLYCEKHSDPPHILSEADKNYFQSYCNASGSEHFDFGIYADA
LTSRIVTSPKFLQKYFYCLWWGLRNLSSLGQSLVTSTYLWEILFAMFIAILGLVLFALLI
GNMQTYLQSLTVRLEEMRVKRRDTEQWMRHRLLPENLRERVRRYDQYKWLETRGVDEETL
IYNLPKDLRRDIKRHLCLDLVRRVPLFESMDEQLLDAMCERLKPSLYTEHTYIVTEGDPV
DEMLFIIRGHLESDTTNGGRTGFFNRGLLKQGDFCGEELLTWALDPKSGANLPSSTRTVR
ALTEVEAFALRAEDLKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYCRRK
NEEIRRREEKRLRAALSGNGNASPSLGATIYASRFAANALRFHRQRNLQLPERTTPVIKL
QKPAEPDFSVEDA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcacatctctgatactagtagaagatttcaggttatgggggggcaaaaagagcgattt
gtgaggtttcaaagtgattcaggatctgaaagatctctggaaatagataggggtggactt
ggtgaatatgtttccagttctgatagttttggacgaacaccaagttctatatcttcttct
gtcagaagagggtgggaaaagggctcacagggtttgaagaatattggccgatcattgcgt
tttggggtctcaagggaagttttttctgaagacttgaaatcatctgacaaaaaaatattt
gatcctcaagacaagttccttcagaaatggaataagatatttgttatatcatgtctagct
gcagtatctgtggatccattgttcttttatcttccggtcattaacaacgattcagaatgc
cttgatatagatgataatatagcaataattgctactgtgcttcggacaatcacagatatc
ttttatttaatgcacatggcccttcagtttcggactgccttcattgctccatcatctaga
gtatttggaagaggagagcttgtgatagatcctataaagatagcaaagcgctacttgtca
acatacttcataattgacattcttgctgttcttcctcttccacaggtggttatctggatt
attatgccaagaatgagaggttcagctgcactaaacaccaaaaattcattgcgattcatt
gtcttgttacagtacctgcccagatttattcgaatattctctctttctaaagaggtaata
agaacagctggtgtattgactgaaacagcatgggctggtgctgcatacaacttacttctt
tatatgcttgcaagccatgttcttggagcttgttggtattttcttgcattggaacggcga
gatacttgctggcgagaggcttgtagtaataattcaaacacatgcgaaactaggatgctc
tattgtgagaagcattctgatcctccgcatatattatctgaagctgacaagaattatttt
caatcttattgtaatgcatctggttctgaacattttgactttgggatttacgctgatgcc
cttacaagtcgaattgtcacatcaccaaaatttttgcagaagtatttctattgcttgtgg
tggggcctacggaatctaagttcacttgggcagagtctggtcacaagcacttatctttgg
gagattttatttgcaatgtttattgctatcctcggcttggttctgtttgccctgcttatt
ggcaacatgcagacatatctgcagtctttgactgttaggttagaagaaatgagagtgaag
cgccgagatacagagcaatggatgcgccatcgtttacttccagaaaacctcagggaacgc
gtccgccggtatgaccagtataagtggttggaaacaagaggggtagatgaagagacttta
atttataatctgccaaaggatctgagacgtgatataaaacgtcatctttgcttggatttg
gtcaggagggtacctttgtttgagagtatggatgaacaacttttggatgcaatgtgcgaa
cgactcaagccatctctttatacagagcatacatatattgtaacagagggagatccagtt
gatgagatgcttttcattattcggggtcatttagaaagtgacacaacaaatggaggaaga
actgggtttttcaaccggggtttactcaaacaaggagatttctgtggggaggaactactg
acatgggctttggatcccaagtctggtgcaaaccttccgtcttctacaagaactgtgaga
gccttgactgaggtagaggcatttgcactaagggcagaggatttgaagtttgttgcaagt
caattcaggcgtctacatagccgtcaggttcagcacactttccgtttctattctcaacac
tggcgaacttgggctgcttgtttcattcaagctgcatggcgtcgatactgtagaagaaaa
aatgaagagattcgccgcagagaggaaaaacgactgcgagcagctctttcagggaacgga
aatgcttctcctagtcttggagcaactatatatgcatctcgatttgctgctaatgcctta
cgttttcatagacaacgtaatttgcagcttccagaaaggacaaccccagtaattaagctt
caaaagccagcagaaccagatttcagtgttgaagatgcttga
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