Cryptomeria japonica (Japanese cedar): 131062006
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Entry
131062006 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131062006 isoform X4
KO
K08518
syntaxin-binding protein 5
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131062006
Membrane trafficking [BR:
cjf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131062006
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
131062006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_WDR5
Beta-prop_VPS8
Synaptobrevin
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
131062006
NCBI-ProteinID:
XP_057851831
LinkDB
All DBs
Position
2:417266296..417601011
Genome browser
AA seq
1144 aa
AA seq
DB search
MFAKRLLQKAVAVAQVNQSGLLQGGLRPDDLNLHVTLHYGIPSTSSLLSFDPFQRILAVA
TLDGRTKIIGGAGIECLLDSPLELPCKFLEFMNNEGYLVSISNQNDIQVWDLNRRALACY
IQWESNITAFTVIQGTSCMYLGDDLGNVAVVKYKKEKGEISRMPYHIPVHIVQESSKDPD
RFPSSVVGIYPQPSASGTRVVIAYENGLIILWDLYKACAVAIRGGANLNLKNDNATSSIG
MRDETEVEADDSDEDKEICCACWASVDGSILAVGYTDGDILLWSMPSGTSSKDRHSDVGI
SSSKTVVKIQLSSSKRRIPVIVLRWCTNGKHDLEDGGQLFVYGGDEIGSPEVVTVLCLKW
SQGMVSLTCTSRLDIALHGSFADMILLPSVGSALDGKYAALLVLTNPGHLHAYDEVSISE
VSLSSEEDRCSIPPQSVPVQAPFAEPCITKAALVLIPKNVNTSKILSQLQRTMQITGPSN
LALGGKWPVTGGIHASSSFEKSMNVEMIYITGHENGSVRVWDASVPFLCLLCSIENKTQN
LTLPGGNASISSLEFCPIAEILAVGDEQGMVRLYKLSAKSADISCQVISEDVKQVHFLQW
ESGFQCVAVFSIHQSPICSIYFAKASRLCVASEGGLVSVINLDSFTILFHCNCLRDKSTK
IISVIMKTVVASKGLPPSPTQQKSERQGENDSTKELSVVFVLTKDENVITIDGDTGAFLG
SEPSHPTHQSTAVSFQLIDTIGWTQDGVTHSLSQDSKHGHFTNKFKNELEESQRDPINET
KVQSELEELGNTIAKSGESLQTLLLLLCSRDALRLYSAASFIKGKSKSVRKVKLEIPCCW
ASTFMNKDQNLFGLVLLCESGLLEFRSLPNMEVIGSVFISSLLRWKYHPNIGRTMSSSGN
GRIALVYNKEMAFLSILANENDLRIPDSLPCLYDKDLAAATDAALKAGIHQTRKKNQIQG
FLGGVIKEIKGGVLRNASPERPITLNLGSDLSNIFAWCPFPELFTVETDDGTECLDIDDI
QIEEDSFNSSPSSSSPAKTGRPLDTQKPDTKDKESERQKLLNLKQDDVKPRLRTPEEIKA
AYGHKTTGDVSEVAGVAMNRLHERGHKLQKIGKNTEELQAGAENFASMADELLKTMEGRK
WWQI
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaagcgattattgcagaaagcagttgcagttgctcaggtgaaccaatctggt
ttactacaagggggtttgagaccagacgatttgaatttacatgtaacgttgcactatgga
attccatcaacatcatctctcttatcctttgatccctttcaacgaattttagctgtggca
acattggatggaagaacaaaaattattggtggtgcaggcattgaatgccttctagattca
cctttagagttgccatgcaaatttctagagtttatgaataatgaaggttatcttgtgagc
atttccaatcaaaatgatattcaggtatgggatttgaatagacgagcattggcatgttat
atccagtgggaatcaaacatcactgcatttactgttattcagggaacttcttgcatgtat
cttggggatgacctaggaaatgttgctgttgtcaaatataagaaagaaaagggagaaatt
tctcggatgccctatcatattcctgtacacatagtacaagaatcttcaaaggatccagac
cgttttccatcttctgtggttggcatttacccacaaccgtctgcttctggcaccagggtg
gttattgcatatgaaaatggattgattattctatgggatttatataaagcatgtgctgtt
gcaatcagaggtggtgcaaatcttaatttgaagaatgataatgcgaccagttctataggg
atgcgagatgaaacagaggtagaagcagatgatagcgatgaagacaaagaaatttgctgt
gcttgctgggcatctgtggatggaagtattcttgctgtgggatatactgatggagatatt
ttgttgtggagtatgccatctggtacaagcagtaaagatcgacattcagatgttggcatt
tcttcaagtaaaactgttgtcaagatacagttgtcctctagcaaacgcagaatccctgtc
atagtattacgatggtgtacaaatggaaagcatgatttggaagatggagggcagctattt
gtatatggtggtgatgaaataggaagccctgaagttgtgacggtactgtgcctcaaatgg
tctcaagggatggtgagtttgacttgcacttcacgccttgatattgcactccatggatct
tttgcagacatgatacttttaccaagtgttggaagtgcattggatggtaaatacgctgcc
cttcttgttttaacaaatccaggccatttacatgcatatgatgaagttagcatatcagag
gtttcacttagctcagaagaagacaggtgctccattcctccccagtctgttcctgtacaa
gcaccatttgctgaaccatgtataactaaggcagcacttgtgcttatacctaagaatgta
aacacctctaaaatattgtctcagttacagcgaaccatgcaaattactggaccatctaat
ctcgctttgggtggaaagtggcctgtcactggcggaattcatgcgtcatcatcatttgag
aagagtatgaacgtagagatgatttacataactgggcatgaaaatgggtctgttagagtt
tgggatgcttcagtgccatttctatgtcttctttgctccatagaaaataagacacaaaat
ctcactttacccggaggtaacgcttcaatatcatctttggagttttgtccaattgctgag
attttggctgtgggtgatgaacaaggaatggtgcgactttacaaacttagtgcaaaatct
gctgatataagttgtcaggttattagtgaagatgtaaagcaagttcattttctgcaatgg
gaaagtggtttccagtgtgttgctgtcttttccattcatcaatctccaatatgctccatt
tattttgcaaaagcttctcgcctatgtgttgcttctgaaggtggtttggtttcagtcatc
aatcttgattcattcacaattttgttccattgtaactgcttaagggataagagtacaaaa
attatttcagtaataatgaagacagttgtagcatcaaagggtctgccaccttctccaaca
caacaaaaatcagaaagacaaggagaaaatgattcaaccaaagagttaagtgttgtgttt
gtcttaaccaaggatgaaaatgtgatcaccattgatggtgatactggtgccttcctaggt
tctgaaccttcacatcccacacaccagtcaactgcggtgtcgtttcaactgatagatact
attgggtggactcaagatggagtgacacattcgttatctcaagattcaaagcatggacat
ttcacaaacaagttcaaaaatgagcttgaagagagccagagggatccaattaatgaaact
aaagtacagtcagaacttgaagagttgggaaatacaattgcaaaatctggagagagtttg
caaactttacttttattgctttgctcaagggatgctttacgcttatattctgcagcctct
tttattaagggaaagagtaaatctgttcgtaaggtaaaactggagataccgtgttgttgg
gcatcaacattcatgaacaaggatcaaaatttatttggccttgttttgttgtgtgagagt
gggttgcttgaatttcgctctttgccaaacatggaagttataggaagtgtttttataagt
agccttctacgatggaaatatcatcccaacatagggagaacaatgtcatcttctggaaat
ggccgcattgctcttgtctataacaaggaaatggcttttctctccatcctagcaaatgaa
aatgatctcaggattccagattctttaccatgcctatatgataaagaccttgcagcagct
acagatgctgcacttaaggctggcatccaccaaacacgaaagaagaatcaaattcaggga
ttccttggtggtgtaattaaggaaatcaaagggggtgtattaagaaatgcatctccagag
cgccctataacactaaatctaggctcagatctttcaaatatctttgcttggtgtccattt
cctgaactctttacagttgagactgatgatggaacagaatgtctggatattgatgatatt
caaattgaagaagactctttcaattcctctccatcatcgtcttctccagctaagaccgga
agaccacttgatacacagaaacctgacacaaaagataaagaaagtgaaaggcagaaacta
ttaaatttaaaacaagatgatgtcaaaccaaggcttcgaactccagaggaaattaaggct
gcctatggtcataagacaactggggatgtttctgaggtagcaggggttgcaatgaatagg
cttcatgagaggggacacaagcttcagaaaatcggcaagaacacagaagaactacaggca
ggagcagagaactttgcatccatggcagatgaacttctgaagacaatggaaggcagaaag
tggtggcaaatatag
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