KEGG   Cryptomeria japonica (Japanese cedar): 131062287
Entry
131062287         CDS       T10556                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131062287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjf03041]
    131062287
Spliceosome [BR:cjf03041]
 Complex A
  U2 snRNP components
   U2 related factors
    131062287
 Complex B
    131062287
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus PqqF-like_C_4 zf-CCCH_4
Other DBs
NCBI-GeneID: 131062287
NCBI-ProteinID: XP_057851892
LinkDB
Position
11:complement(518102889..518111157)
AA seq 313 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTRPSISPTILLSNMYQRPDMVTP
GMDIQGQAMDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE
QAATALRSLQGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISREL
RRRLFGRYRRHSYSRSRSRSVSPYRDGDKHRYYEDRHRGHGGRGHDRRYDDADDRDGHRG
QRTRSRSPGGRRRGRSRSYSPRRNRSPIREGSAERRAKIEQWNREREIQASSVNVHQPMQ
NGGSYSNQPSYGY
NT seq 942 nt   +upstreamnt  +downstreamnt
atggcagagcatctagcctccatctttggcactgaaaaagacagagttaactgccctttt
tactttaagattggagcctgcaggcatggggatcgatgttcaaggctgcatacgaggccc
tccatcagccctactattttgctttcaaacatgtaccagaggcctgatatggtaacacct
gggatggatatccaaggacaagcaatggatcctcgaaaaattcaagaacattttgaggat
ttctatgaggatttatttgaagagcttagcaagtatggagaaattgaaagtttgaatata
tgcgacaatctagctgatcatatggttgggaatgtttatgtgcaattccgagaggaggaa
caggctgcaactgcattacggtctttgcaaggaaggttttatgcaggtcgacctatcatt
gttgatttttctccggtgaccgactttcgtgaagcaacttgtagacagtatgaggagaat
acttgcaaccgtggtgggtactgtaatttcatgcatctgaagaaaataagtcgtgagctg
cgaagaaggttatttggaagatataggaggcacagctatagtcggagtcgaagcagaagt
gtcagcccatacagggatggtgacaaacatcgctattatgaagatcgtcatcgtggacat
ggcggtcgtgggcacgacagaaggtatgacgatgcggatgatcgtgatggtcaccgtggc
caaagaacacgaagccgtagcccaggaggacgtagaaggggacgtagcaggagctatagt
cctagacgcaacaggagtccaattcgtgaaggcagtgccgagagaagggctaagattgaa
caatggaaccgggaaagagaaattcaagcgtcatctgttaatgttcatcagcctatgcaa
aatggaggatcttattcaaatcaaccaagttatggatattga

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