Cryptomeria japonica (Japanese cedar): 131062644
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Entry
131062644 CDS
T10556
Name
(RefSeq) phytochrome
KO
K12121
phytochrome B
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04712
Circadian rhythm - plant
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131062644
NCBI-ProteinID:
XP_057852334
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Position
8:372276583..372299076
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AA seq
1145 aa
AA seq
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MASSSRAEASSGRGSASASNTNRRSNSTSNTNSKAAMAMKQYNADTQLHLVFEQSGESGK
SFDYTRSIKSTTESVPEQQITAYLSRMQRGGNIQPFGCMLAVEESTFRIIAYSENAAEML
DAAGQSESQSVPDVKSEAAVRIGSDVRRLFTPWSARNLERAAMTREISLANPIAAESKSG
KPFYAIVHRIDVGIVIDLEPVRRGEAAAFGAWGGAEGVAGGAVPSQRLAVRATSRLQAVP
NGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIP
QASRFLFMQNRVRMICDCRANPVGVIQVEELKQPLCLVGSTLRAPHGCHAQYMANMGSIA
SLVMAVIVNGNGNDEEGSSGRVKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINME
MQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGKFWLLGV
TPTGAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFW
FRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQL
ILRGSFQDIDDSETKTMVHVQLHDLKLQGIDELSSVANEMVRLIETATAPILAVDSAGIV
NGWNAKAAELTGLPVGEAMGKSLVHDLVFEESMETVEKMLYHALRGEEDRNVEIKLRTFG
PQRQKKVIYLVVNACSSRDYTGNIVGVSFVGQDVTGQKVVMDKFIRIQGDYKTIVQSPNP
LIPPIFASDEYTCCSEWNAAMEKLTGWTRDEVIGKMLVGEVFGGCCRLKGQDAMTKFTIV
LHGAIDGQDTEKFPFAFFDRQGKYVEALLTANKRTDADGRITGAFCFVQIASSELQQALE
IQRQQEKKCFARLKELAYIRQEMKNPLHGITFTRKLLEDTDLSDDQKQFIETSAVCERQM
QKIMDDMDLDSIENGYMELDVAEFVLGTVMDAVVSQGMIILREKGLQLIREIPSEVKTMC
LYGDQVRLQQILADFLLNAVRYTPSPEGWVTIKVLPTLKQLGNGIHVHLEFRITHPGPGL
PAELIQDMFDRKRWTMQEGVGLSMCRKLLKLMDGDVQYVRESRTCYFLVNLELPLVHRED
AGSVK
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgagtagcagggcggaggcgtcgagtggcaggggctcagcatcagctagcaat
accaacaggaggagcaattcaaccagtaacactaacagtaaagcagcaatggcgatgaag
cagtacaacgcggacacacaattgcatcttgtgttcgaacagtcgggagaatcgggtaag
tcttttgattacactaggtccataaagtccacaacagagtcggttcctgaacagcaaatt
acggcctatctgtctcgaatgcaaagaggaggaaatattcagccttttggatgcatgctt
gctgtcgaggaaagcacctttaggatcatcgcttacagtgaaaatgcggcggaaatgctg
gatgcggcggggcagagcgagagtcagtctgttcctgatgtgaaaagtgaggcagccgtg
agaattgggagtgatgtgaggaggctcttcacgccgtggagcgcgcggaacttggagagg
gccgcgatgacgcgtgaaataagcctggcgaacccaattgcggcggagtccaagagcggc
aagcccttttatgccattgtgcacaggattgatgttgggattgtgattgatttggagccg
gtgagaagaggggaggcggcggcttttggggcgtggggaggagcagagggcgtcgcagga
ggggctgtgccgtcgcagagactggccgtgagggcaacgtcgaggctgcaggctgtgccc
aacggggatatcggtctgctttgcgatgctgttgttgaggaagtcagggaactcactggg
tatgacagggttatggtttacaagtttcatgaagatgagcatggggaggttgttgcagaa
attaggcgctctgacttggagccctaccttggactacattatcctgccactgatattccc
caggcatcccggtttcttttcatgcagaacagggtgcgtatgatctgtgattgccgtgct
aatcctgtcggagtcatacaggtggaggaattaaagcagcccctctgtttggtgggttct
acgctaagggcaccccacggttgtcatgctcagtacatggctaatatgggctcaattgct
tctcttgttatggctgtaattgtcaatggaaatggaaacgatgaagaaggcagcagcggg
cgagtgaagctttggggtttggttgtttgtcatcacacttcacctcgagccgttcccttt
ccccttcgctccgcttgtgaatttctgatgcagacatttggtcttcagattaatatggaa
atgcaattggctgctcaattgacagagaataacattcttaggactcaaacacttctctgt
gatatgcttctccgagacgcacctattggaattgtaacccagtctcctagtatcatggat
cttgttaagtgtgatggggctgccctttactacgggggtaagttctggttgctcggagtg
acccccacgggagctcaaattaaggacattgcagactggttgcttgaataccacggggat
tcaacaggtttgagcacagatagtttagcagatgctggctacccgggtgcagcatccctt
ggggatgctgtctgtggtatggctgctgctagaatcacatcaaaagattttttgttctgg
tttagatctcacactgcaaaagagatgaaatggggaggagcaaagcatcatcccgatgat
aaagatgatggtcggagaatgcaccctcgttcttcattcaaggcattcctagaagttgtc
aaaagaagaagcttgccatgggaaaatgtagaaatggatgcaattcactctctgcagctt
atcctacgtggttcatttcaagacattgatgacagtgaaactaaaactatggttcatgtt
cagctacatgatttaaaattgcagggcattgatgagcttagctccgtggcaaatgagatg
gtgcgattgattgaaacagctactgcacctattttagctgtagattctgctggaattgtg
aatggatggaatgcaaaggcggcagaattgacaggacttccagttggagaagctatgggc
aagtcattagttcatgaccttgtttttgaagaatctatggagactgtggaaaaaatgctc
tatcatgctctgagaggagaggaagatagaaatgttgagataaagttgaggacgtttggt
ccacagaggcagaaaaaggttatatatttggttgtcaatgcctgttcaagcagggattat
acaggcaacattgttggagttagctttgtaggtcaagatgttacaggtcaaaaggtggtc
atggataagttcatccgaattcaaggtgactacaagactattgtgcaaagccccaatcct
ttgattcctcccatatttgcttcagatgaatatacatgctgctctgaatggaatgcggca
atggaaaagctaacaggctggaccagagatgaggttattggtaaaatgcttgtgggagag
gtttttggtggttgttgtcggctaaaaggtcaagatgcaatgaccaaatttacaattgtg
ctacatggtgcaattgatggccaggatacagagaagttcccctttgcattttttgacaga
caaggcaaatatgtggaagcacttctaacagcaaacaagagaacagatgcagatggtcga
attacaggagcattttgttttgtgcagatagcaagctctgaactgcagcaggcactggag
attcagaggcaacaagagaagaaatgttttgcaagattgaaggagttggcatatattcga
caggaaatgaaaaatcctttacatggaattacatttactaggaaactcttagaagatact
gatctttctgatgatcagaaacagttcattgaaacaagtgctgtttgtgaaagacagatg
cagaagattatggatgatatggatttagacagtattgagaatgggtatatggaactagac
gtagctgaatttgtcctgggaactgttatggatgctgttgtcagtcaaggtatgattata
ctgagagagaagggcttgcagttgatacgtgaaattcctagtgaggtaaaaacaatgtgt
ttatatggagatcaagtcagattgcagcaaattttggcagatttcttgttaaatgcagtg
cggtatacaccatccccagagggatgggtaacaatcaaagtgttaccaaccttaaagcag
cttggcaatggtatacatgttcacttagaattcaggataactcatcctggaccagggcta
cctgcagaacttatccaagatatgtttgatagaaaaagatggaccatgcaagagggagtt
ggtctaagtatgtgccggaaacttctcaaattaatggatggtgatgtgcaatacgtgagg
gagtccagaacatgctatttccttgtgaaccttgaacttccactggtccacagagaagat
gcagggagtgtcaaatag
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