Cryptomeria japonica (Japanese cedar): 131062741
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Entry
131062741 CDS
T10556
Name
(RefSeq) transcription initiation factor IIB-1
KO
K03124
transcription initiation factor TFIIB
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131062741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjf03021
]
131062741
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
131062741
Prokaryotic type
Archaeal type
TFB
131062741
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_N
APP_E2
Ski_Sno_DHD
ORC6
Motif
Other DBs
NCBI-GeneID:
131062741
NCBI-ProteinID:
XP_057852447
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All DBs
Position
9:122585371..122586711
Genome browser
AA seq
276 aa
AA seq
DB search
MKNSRIRNKNLKPDSIMTDARKMKSKREEIVTDHILQIAQYAAAIKLDQTVTERAQTIYR
DLSEKTVVRKVKMCALHLACIYIAAKQLHRMKTMEELAASVKDFQIVSKADIYRAMRYIK
KYTPEATFATNLSVGSCSSADEEKEIDKFVGSESVRAYLAHLSQLLKSSNLVDCEMINCA
EKMAAEAAQNLGVCTTRAGPHTQAATLLWICSHFVEKKEAVDVNLVAQHSVGKYTIRNAF
YDMLPHLPALVPQNLLSKDVLEKLQATWAGCRHHLP
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagcaggattcggaacaagaatctcaagcccgattcaattatgacagatgcg
agaaagatgaaaagcaaaagagaagaaatagtgacagatcacattcttcagatcgctcaa
tatgcggccgccattaagctggatcaaactgtaacagaacgcgctcagacaatttataga
gatttatctgagaaaacagtggtgaggaaagttaaaatgtgcgcccttcacctcgcttgc
atctacatcgccgcgaaacaacttcacagaatgaagacaatggaggaattagcagcgtct
gttaaagattttcagattgtgagcaaagctgacatttatagggcaatgagatacattaaa
aaatatacaccagaggccacttttgctaccaatttatcagtcggcagctgctcttctgct
gatgaggagaaagaaattgataaatttgttggcagcgagtcggttagggcttatctggct
cacctttcacagcttctgaaatcttcaaatttggtggactgtgagatgattaactgtgca
gagaaaatggcggccgaggcggctcaaaatttgggggtttgtactacgagagccgggcct
cacactcaggcagcgactttgctgtggatttgttcgcattttgttgagaagaaagaagca
gtggatgtaaatttggtggctcagcattctgtgggaaaatacaccattcgtaacgctttc
tatgatatgcttcctcatttgccggctttggttccgcagaatttgctttctaaagatgtt
ttggagaagcttcaagctacctgggctggatgccgccatcacttaccttga
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