Cryptomeria japonica (Japanese cedar): 131062746
Help
Entry
131062746 CDS
T10556
Name
(RefSeq) transcription factor RAX3
KO
K09422
transcription factor MYB, plant
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjf03000
]
131062746
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
131062746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
X-Tfes_XVIPCD
HTH_CHD1_Hrp3
SNAP-25
Motif
Other DBs
NCBI-GeneID:
131062746
NCBI-ProteinID:
XP_057852452
LinkDB
All DBs
Position
9:complement(107135211..107138242)
Genome browser
AA seq
443 aa
AA seq
DB search
MGRAPCCDKANVKKGPWSPEEDSKLKAYIEKHGTGGNWIALPQKVGLKRCGKSCRLRWLN
YLRPNIKHGGFSEEEDNIICGLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK
RKDQHTRRLAAAAAMAAAKHAQMNDLKRYVPSEANNSTSVYATQPAAVEQQMNMNVSGPY
ANFSHGITPQLFEQTTCAEAPTIADTRPSIQSSRFQLNLQQAFDHQILMPDNNTSFRKLI
ERLEASLIDRSNNMNFMTTSQMHTSNCITSNNINNTSLQIPHSTEYDTAYPPLDYGRCIE
NEVKLESPSLLPAAALPHNDTSLVFSASSISSGSPEPNYQSAWTNTLNVENNNTMNMEAC
EFSMDMNDLLYCTYNNSSSVFPQQKQEYNNGYGPSLGNGTMNTSAWTTDMKSSSSSSIYP
YTLPSENGLHEGIYDQEGAMFEL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagcaccatgctgtgataaagccaatgtgaaaaaaggaccatggtcccctgaa
gaggactccaaactcaaggcctacatagagaagcatggaactggaggcaattggattgcc
ctacctcagaaagttggtttgaaaagatgtggaaagagttgcagacttagatggttgaat
tacttgaggccaaatatcaagcatggaggattctcagaagaagaagacaatatcatttgt
ggcctgtatatcagtattggaagcagatggtctattattgcagcccagttgccaggcaga
actgataatgatattaaaaactactggaacacaagattaaagaagaaactgcttggaaaa
cgcaaggatcaacacacccgtcgtcttgctgctgctgcagcaatggctgcagcaaaacat
gctcaaatgaatgacctaaaaaggtatgtcccttcagaagccaacaatagcacaagcgta
tatgcaacacagcctgcagcagtagagcagcaaatgaacatgaatgtgagtggcccttat
gctaatttcagtcatgggataactccccagttgtttgaacaaaccacttgtgctgaagca
cccaccattgctgataccaggccaagcattcaatcatctagatttcagctaaaccttcaa
caagcctttgatcatcaaattttaatgcctgataacaatacttcttttaggaagctcata
gagaggcttgaggcttctcttattgatcgatcaaacaatatgaatttcatgaccacctct
caaatgcacacatccaactgcataactagcaataatattaacaatacctctctgcaaata
ccacattctactgagtatgacacagcctaccctccattggattatggaagatgcattgaa
aatgaagtaaaattagaaagcccatcactattacctgcagctgcattgcctcataatgac
acttcactagtgttttctgcatcctctatcagctctggttctcctgaaccaaactatcag
tcagcttggacaaatactctcaatgttgagaacaacaacaccatgaacatggaagcatgt
gaattctcaatggatatgaatgatcttctgtactgcacgtacaacaacagtagctcagta
ttcccacagcagaaacaagaatacaacaatgggtatgggccatctcttggcaatggcaca
atgaatacgtctgcatggaccactgatatgaagtcctcctctagcagcagtatttatcct
tacactttgccatccgaaaatggcctgcatgaaggtatttatgatcaggagggtgcaatg
tttgaattatag
DBGET
integrated database retrieval system
