Cryptomeria japonica (Japanese cedar): 131063363
Help
Entry
131063363 CDS
T10556
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131063363
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131063363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
Ig_DR_A0283-like
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
131063363
NCBI-ProteinID:
XP_059068526
LinkDB
All DBs
Position
10:465551519..465636458
Genome browser
AA seq
329 aa
AA seq
DB search
MRVSKPQNRDNATVSRFKKTKLLQMKARKFRDKRQFKNQFISTEVFPADSAYIGLAAPGE
AGSWQKESKGYQFWTKTNQNGFFQIVNINSGEYNIYGWIPNVVGDYKNEIVLQLSPGSSI
DLGDLIYKPPRNGPTLWEIGIADRTALEFYVPDPIPKFINSLYINHPEKFRQYGLWERYA
DLNPENDLVYRVGVSDYTKDWFFAHVTRKRNDGTYQGTTWQIKFQIKTLIQSGFYTLFIS
IASSTRSILQVRCNDPKVDPHFETPTIGQDNAIARHGIHGFYQLFIMQINPYWLVHGDNT
IFLTQRVNTGPFNGILYDYIRLEEPNVSY
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgtcaaagcctcagaatagagacaatgctacggtttcaaggtttaagaaaaca
aagcttttacaaatgaaggcacgtaaatttagagataaaaggcagttcaaaaatcaattt
atttctacagaagtctttcctgctgattctgcatacattgggttggctgctcctggtgag
gctggatcttggcaaaaggaaagtaagggttatcaattctggacgaagacaaatcaaaat
ggattttttcaaattgttaatatcaattctggcgagtataatatatatggatggataccg
aatgtagttggtgattacaagaatgagattgtccttcaactctccccaggttcatccatt
gatcttggtgatttgatatacaaaccaccaagaaatggaccaactttatgggaaattggc
attgctgatagaactgctttggagttctatgttccagatccaataccaaagtttatcaat
agcctatatataaatcaccctgaaaagtttcgtcaatatggactttgggaaagatatgca
gatctgaatcctgaaaatgatctagtatatagagttggtgttagtgactacaccaaagat
tggttttttgctcatgttaccaggaagagaaatgatgggacatatcaaggaacaacatgg
caaatcaaatttcaaattaagacattgattcaatccgggttttatacattgttcatatca
attgcctcctcaacacgttctattcttcaggtacgatgcaatgatccaaaagtagaccct
cattttgagactccaacaattggacaagacaatgcaatagctcgacatggaattcatgga
ttttaccaacttttcattatgcaaataaatccttattggttggtacatggagataatacg
atattcctcacacaaagggtgaatacagggccatttaatggcattttatatgattatata
agattagaggagcccaatgtgtcatattaa
DBGET
integrated database retrieval system
