Cryptomeria japonica (Japanese cedar): 131063504
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Entry
131063504 CDS
T10556
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131063504
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cjf01007
]
131063504
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjf03016
]
131063504
03029 Mitochondrial biogenesis [BR:
cjf03029
]
131063504
Enzymes [BR:
cjf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
131063504
Amino acid related enzymes [BR:
cjf01007
]
Aminoacyl-tRNA synthetase
Class I (G)
131063504
Transfer RNA biogenesis [BR:
cjf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
131063504
Prokaryotic type
Other AARSs
131063504
Mitochondrial biogenesis [BR:
cjf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
131063504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
Motif
Other DBs
NCBI-GeneID:
131063504
NCBI-ProteinID:
XP_057853330
LinkDB
All DBs
Position
6:complement(199253830..199306373)
Genome browser
AA seq
723 aa
AA seq
DB search
MGSRFVLLQSSGTFTHCSCIIKSPPLSFVCGSYISGRPVFGLSSSLRQEIPCKGVAGLAS
FLPPKNSIFVDSDSFVSFFSNFSLHFQDLHWKPVLRRTGWKGISRRVILSKALTTSGSMS
EEMASTDSDQGGNTNAVVIGTGSVRQQVSRLVKESLRATVPSESSLEPIVAICGAKFGDY
QCNNAMGIWSKIKGQTTEFKNPNSVGQAIMKNLPKSNMIEKSSVAGPGFVNIVLSDLWIA
ERIRQMLQDGISTWAPVLPITRAVVDFSSPNIAKEMHVGHLRSTIIGDCLARMLEFCKVE
VLRRNHVGDWGTQFGMLIEYLFEELPNWEELGEQAIGDLQTFYKASKQKFDEDANFKERA
QQAVVRLQGGEDKYRKAWNEICDVSRKEFDQVYKRLKVEIEEKGESFYNPYIPKVLNELD
EKRLIEESEGAKVIFIEGQKIPLIVVKRDGGFNYASTDMAALKYRLSEEKAQWIVYVTDV
GQSLHFEMVFSAAKRAGWLPINNDVSFPKARHVGFGLVLGTDGKRFRTRSTEVVRLVDLL
DEAKHRSKEELIKRGKEDEWTPEELENAAEAIGYGAVKYADLKNNRLTNYTFNFDQMLDV
RGNTAVYLLYAHARICSIIRKSGKDIEELKKTGSIQLIHENERLLGMHLIQFSEIVEDAC
TELLPNTLCEYLYNLSENFTKFYSTCKVVGSEEETSRLLLCEATAIVIRECFKLLGITPL
YKL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtcgatttgtgctgctgcaatcgtcgggaacatttacccactgttcttgcatt
attaaatctcctccactttcattcgtttgtgggtcatacatttctgggaggccagtgttt
gggctctcttcttcattgagacaggaaattccatgcaaaggagtagctggtttagcatca
ttcctgcctcccaaaaacagtatatttgtggattctgattcattcgtttcttttttttct
aacttcagcttgcatttccaagacttgcattggaagcctgtcttgaggaggactggttgg
aagggaatatcaagaagagttattttatcaaaggctttaacaacatcaggttctatgtcg
gaggaaatggcctctacagattctgaccaaggaggaaacaccaatgctgttgttattgga
actggaagtgtcaggcaacaggtatcaagattggtaaaggagtctctaagggcaacagta
cccagtgagtcgagtttggagccaatagttgcaatttgtggtgcaaagtttggtgactac
cagtgcaataatgcaatgggaatatggtccaagattaaaggacaaacaactgaattcaag
aatccaaactctgttgggcaggcgataatgaaaaacttgcccaaatctaatatgatagag
aagagctctgttgctggtcctggttttgtaaatattgttttgtcagatttatggattgca
gagagaattcgacaaatgttacaagatggcatcagtacctgggctcctgttcttccaata
accagagcagttgtagacttctcctctcctaatattgctaaagaaatgcatgttggacac
ttaaggtcaacaataattggtgattgccttgctcgaatgctagagttttgtaaggttgaa
gttttacgtcgaaaccatgtgggtgactggggtactcagtttggtatgttgattgagtac
ctttttgaagagttacccaattgggaggaacttggtgaacaagcaattggtgatttgcag
acattttacaaggcttccaagcaaaagtttgatgaagatgccaacttcaaagagagagca
caacaagctgttgttcgacttcagggtggtgaagataaatatcgtaaagcgtggaatgaa
atctgtgatgtaagtcgcaaggagtttgatcaagtctataaaagacttaaagttgaaata
gaagaaaagggggaaagcttttataatccatatataccaaaggttctgaatgagctggat
gagaagaggcttattgaggaaagtgagggtgcaaaagttatatttattgaaggtcaaaaa
attcctttaatagttgtgaaaagagatggcggcttcaattatgcatcaactgatatggca
gcactcaagtatcgactcagtgaagagaaagctcagtggattgtttatgtgacagatgtg
ggtcaatcattgcattttgagatggtctttagcgctgcaaagcgggctggatggcttcct
atcaacaatgatgtttcatttccaaaagcaaggcatgttggatttggcctggttcttggt
acagatgggaaacgtttccggacacgcagtactgaagttgttcgccttgttgatttgctt
gatgaggccaagcaccgaagcaaggaggaactcatcaagcgtggcaaggaagatgaatgg
acaccagaagaactagagaatgctgctgaagcaattggatatggagcagtaaagtatgcg
gatttgaagaataacaggctaacaaactacacgtttaattttgatcaaatgttggatgtt
cggggaaatacagcagtttatcttttgtatgcgcatgctcgcatatgttctatcattagg
aagtctggaaaagacatagaggaactcaagaagacaggaagcattcagttgattcatgag
aatgaacggctgctaggaatgcatctcattcaattttccgagattgtggaggatgcttgc
actgaacttttgccaaatacattatgcgagtacctttataacttatctgaaaattttaca
aagttctattcaacttgcaaggttgtgggatctgaggaagagacaagtaggttattgcta
tgcgaggctacagcaattgtcatcagagaatgttttaagttactggggattactcctctt
tacaaattgtag
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