Cryptomeria japonica (Japanese cedar): 131063594
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Entry
131063594 CDS
T10556
Name
(RefSeq) protein HASTY 1 isoform X1
KO
K14289
exportin-5
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131063594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjf03016
]
131063594
03036 Chromosome and associated proteins [BR:
cjf03036
]
131063594
Transfer RNA biogenesis [BR:
cjf03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
131063594
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
131063594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
131063594
NCBI-ProteinID:
XP_057853441
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Position
4:336846377..337010471
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AA seq
1218 aa
AA seq
DB search
MGEIASVAQAVIAALDWNSSAETRHSASVFLDSIKSGDVRVLAATSFELVKPNWSSEIRH
YGFKLLQHLVRLRWEELHSEERLQFVEMVAAMVCEVAKPHEVWVLKSQTAALFAEVARRE
LPLWEKLLSTIFSLRTKSPIHAEMVAMVLRWLPEDITVHNEDLEGDRRRQLVRSLKDSLP
YIFDQLHMLFGQYLGATVNAVEQNQMDVAKQNAATVTAALNAVNAYAEWVPVPLLGNSHL
TDVCGHLLRYREFRLIACEFFKMIALRRRPSDETLLDFDSTMACSFDIVMNSARDFLENS
ASGISCLDDSEVEFAECICLTMVALGCNNLQCIAGHEERLSLYLLEMLGFLQHPKFALHF
ESLPLWLFLLRGSSSNLKTNEQVEGSRSSLISGTNSTAVFIDKEKKGMTIRISDDFCGII
LDVAFQRMLKKNPTIGLTLSNNSLEIWSDDFASKSDFGQYRGKLIELIRLIGAQQPVIAA
SRISQRIEGMINLYLVGSIPSQDLAVLEGTQLALDTTISAIFDGASYAVNISSPAVHHTL
HTILGGILQRLCSLNWTEPAQVEIIGRLLDAMGPYLKHFPEAVGSIINKLFDLLKLLPVI
QKGHTQDLMAVSMSRARLQICTSFIRIAQAAATSLLPHMEQIAGIMARLEVDGQLRQSEH
NLLGEAFLIMASAAGSEQQQKILAWLLEPISKQWLQMEWQTKYLSEPMGLVHLLTRGPNT
SENELMWYIFHTITFYERALKRCGSKKTPHCTSQESSVIDMDSAYVHPLASHLSWMLPPL
LKVLRCIHSLWSQAIVQALPVEMRAALLMSPAEQSGLLGEVAPKSKGMVAGDGSQLDFSR
PQNMESKENEIRNWLKGVRDSGYILLGLATGIGDQFYNCVDSDSLVVALLENIEAMHFRH
IRQLIHSVLTPFVKTCPTICWGAWLGIFLPRLLGHCQKSLIDSWSSLIWKGRANVPDCCG
DGSAPDLKAEVMEEKILRDLTRETCGLLAALASPGANKSLPSSEQIEQLNRMESSPLIDT
EKIASESLIGFLFKHNDGAVPALQICLKAFSWPDSEAVAKVVLFCGSVVMFAVSTNNIEL
QQFVAKDLFEAVIQGLTLESNAMIHAELISLCREIFIQLSTRHLARQVLLSQLSVTPDAL
SAFENALLKTSSAKEQKQHMKSLLLSAAGSQLKALLAQKNTKVITNVTLTAARSLQHTSE
STLDEGDTIGLAAVNTAF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgggggagatcgcaagcgtagcgcaggcggtgattgcagccttggactggaactcctct
gctgaaaccaggcactctgcttccgtttttctcgattctataaaatcaggagatgttcgt
gttttagcagctacctcattcgaattggtaaagccgaactggtcttctgaaattcgccat
tatggatttaaattgctacagcatttagtgcggttgcgatgggaggagctccacagtgaa
gaaaggctgcagtttgttgagatggtagctgccatggtttgtgaggtagcaaaacctcat
gaagtatgggtattaaagagccagactgcagcactttttgctgaggttgcaagaagagaa
cttcctttatgggagaaattattatcaactattttttctttaagaaccaagagtccaata
catgcagaaatggtggctatggtgttgagatggcttccagaggacataactgtgcacaat
gaagatttggaaggagatcgacggaggcagttagttcgtagtctaaaagattccttgcca
tacattttcgatcaattacatatgttgtttggtcaatatttaggagcaacagtaaatgct
gtggagcaaaaccaaatggatgtggctaaacagaatgctgctacagttactgcagctctt
aatgctgttaatgcatatgcagaatgggtccctgtcccacttctagggaactctcatttg
acagatgtatgtggacatctgctgcgctatcgtgaatttcgtctcattgcttgtgaattt
tttaagatgattgctttaaggcgaaggccatctgatgaaactcttttggattttgattca
accatggcttgtagctttgatattgttatgaattctgcaagggatttcttggagaactca
gcttcaggaatcagttgccttgatgacagtgaagttgaatttgctgaatgcatatgccta
actatggttgctctagggtgtaataacttgcagtgcattgctggacatgaagaaaggctt
tccttatatcttttagagatgcttggatttttgcagcatcccaagtttgcacttcatttt
gagtcattgcctctctggttgtttttgttgagggggtcaagttcaaacctgaagacaaat
gaacaagtggaagggagtagatcatctcttatcagcgggacaaactcaactgcagtgttc
attgataaggaaaagaagggaatgacaattagaatcagtgatgatttctgtggcattatt
ttggatgttgcttttcagcgtatgctcaagaaaaaccctactattggacttacattatca
aataattcattggaaatttggagtgatgattttgcaagcaagagtgattttggccagtat
cgtggtaaactgatcgagcttattcgccttattggtgctcaacagccagtaatagctgct
tcaaggatttctcagagaattgaaggaatgataaatttatatttagttgggtcgattcct
tctcaggatcttgcagtcttagaaggcactcaacttgcactggatacaacaataagtgcc
atttttgatggggcatcatatgctgtaaacatttcgtctcctgctgtgcatcatacattg
cataccattcttggaggcatattgcagaggttgtgttctctaaactggacagaacctgca
caagtagaaattattgggaggcttttagatgcaatggggccatatctaaagcattttcca
gaagcagtaggcagcataattaataaactctttgatcttttgaagttgcttccagtaatt
cagaagggtcatactcaggatcttatggcagtgtccatgagtcgagcaaggttacagatt
tgcacttcatttattcgaattgcacaggcagctgccacaagccttctacctcatatggag
caaattgccggaatcatggctcgtcttgaggtggatggacaacttcgacagagtgaacac
aatcttcttggagaagcatttcttattatggcttcagctgctgggagtgaacaacaacaa
aaaatattggcatggttgcttgagccaataagcaaacagtggcttcaaatggaatggcaa
actaaatacttgtctgagccaatgggtttggtacatctcttaactagaggaccaaataca
tcagagaatgaattaatgtggtacatttttcatacaataaccttttatgagagagctctt
aaaagatgtggtagtaaaaagacccctcattgtacttctcaagagtcttcagttattgat
atggattctgcttatgttcatcctttggcttcccatttaagctggatgttacctcctctt
ttgaaggtactccgctgcatacattcactttggtcacaggcaatagttcaagcattgcca
gtagagatgcgagctgctctactcatgtctcctgctgagcaatctggtcttttgggtgag
gtggcaccaaaatcaaaagggatggtagccggtgatggaagtcaattggattttagtaga
ccacaaaatatggagtcaaaagaaaatgaaatacgaaactggttaaaaggagtccgggac
agtgggtatattctattaggtctagcaacaggcattggggatcaattttataactgtgta
gatagtgattctcttgttgtagcccttcttgaaaacattgaagcaatgcatttcagacac
atccgtcagcttatccactctgttctaactccttttgtaaaaacttgccctacaatctgt
tggggagcatggttaggaatatttttgcctcgcttacttgggcattgtcagaaatctcta
attgattcttggagcagcctcatatggaaaggaagagctaatgtgccagattgttgtggt
gatggttctgcaccagatttaaaagcagaggttatggaagaaaagatcctcagagatttg
actcgagagacttgcggtttattggcagcattggcttcccctggggccaataagagtcta
ccatcgagtgaacaaattgaacaacttaaccgcatggaatcatctcccctgattgacacc
gaaaagattgcgtctgagtcattaataggtttcttattcaagcacaacgatggagctgtt
cctgcactccagatatgcttaaaagccttctcatggcctgatagtgaagctgtggcaaaa
gttgttttattttgtggatctgttgtcatgtttgctgtttccaccaataatattgaactc
cagcagtttgtggcaaaggatttgtttgaagcagtcattcaaggtttaactctagagtca
aatgcaatgatccatgcagaactcattagtctttgtcgtgaaatttttattcaactctcg
actagacatcttgcaagacaagtgcttctgtcacagttgtctgttacaccagatgcttta
tcagcttttgaaaatgctttgttgaagacatctagtgcaaaagagcaaaagcaacacatg
aaaagtttgttattgtcagcagctggtagccaattgaaagctctattggctcagaagaat
acgaaagttattaccaatgtaactttaacagcagctcgatccttgcaacatacaagcgaa
tcaactttggatgaaggtgatacaattggattggcagcagttaatacagctttctaa
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integrated database retrieval system
