Cryptomeria japonica (Japanese cedar): 131063606
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Entry
131063606 CDS
T10556
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131063606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131063606
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
131063606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
Nucleolin_bd
AAA_22
AAA_16
TIP49
AAA_14
AAA_2
AAA_33
IstB_IS21
NPHP3_N
RNA_helicase
AAA_28
Viral_helicase1
nSTAND3
Rad17
AAA_18
AAA_17
Parvo_NS1
ATPase_2
Mg_chelatase
AAA_3
Bac_DnaA
TsaE
NACHT
NB-ARC
ABC_tran
AAA_19
AAA_11
Zeta_toxin
Cytidylate_kin2
TniB
PduV-EutP
ATP-synt_ab
CCD97-like_C
Zot
Tankyrase_bdg_C
Motif
Other DBs
NCBI-GeneID:
131063606
NCBI-ProteinID:
XP_059075802
LinkDB
All DBs
Position
4:complement(341615552..341695296)
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AA seq
793 aa
AA seq
DB search
MRHKTRCAKLRTVHRSFFDRLILPRVEQYAINHDLHDLDAAVNYLRTNYREYRRHKEDSF
RKIVFRAIQTLQHDKNHQKRKRNRLHEEEEGEEEDEEEEEEEASSSGESDSSGSQFELNP
TSFPGLMNSVLRTNYGANVNASSPKSSESTKITQENTKMDINTELCSENGNELNGIVSDS
KEKQESQGGFEVKLKKEDRGFDSRVMFKDLGGLSGVINEIMEIIYPLFHPEIYPWLGVQP
MKGILLHGPPGCGKTKLAHAIANEAGVPFYKISATEVVSGVSGESEENIRNLFSKALQTA
PSIIFIDEIDAISAKRETLQREMERRIVIQLLTCMDESHETIISGGQESDAEMPKKKSGH
VLVIGATNRPDSLDPALRRPGRFDREIVLGVPDENSRVEILSVITRGLRLDGLFDFKKIA
KCTPGFVGADLTALTREAASVAIKRMIASRNPQNLLKCEDIEATENAWWKKAWTQEEMNN
LSITMADFEEAATKVQPSTRREGFSAIPNVKWDDVGALGSLRKDFELHVVRRIKHPEEYE
ALGMDLDNGFLLYGPPGCGKTLVAKAVANEAGANFIHIKGPELLNKYVGESELAIRTIFT
RARTCSPCILFFDEIDALTTKRGKDGGWVVERLLNQLLIEMDGSEKRKGVFVIGATNRPE
VMDPAVLRPGRFGKLLYVPIPDAEGRVSILKTLTRKRPLSAEVDLNYIGHSQSCENFSGA
DLAALVNEACMCALQERITTAVEADSDVRKYALVVNLSHFEQAFKRVVPSVSKAQRHYYE
QVYQKFMGLTGNH
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaggcataaaacgaggtgtgctaagttgcgcactgtccatcgctcattcttcgatcga
ttgatacttccgagggttgagcaatatgccattaaccacgacctccacgacctcgacgcc
gctgtcaattatctcagaacaaattatcgcgagtacagacgtcacaaagaagactccttt
cgcaaaatagttttccgcgccatccaaaccctccaacatgacaaaaatcatcaaaagaga
aagcgcaacaggctccatgaagaggaagaaggagaagaggaggatgaggaggaggaggag
gaagaagcatcatcatctggagaaagcgacagcagcgggtcacaattcgaattgaatccg
acatctttcccaggcctcatgaactctgttttgagaacaaactacggcgccaatgttaat
gcttcctctccaaaatcctcagagtctactaagatcacgcaggagaacactaagatggat
atcaacactgaactgtgtagcgaaaatggtaatgaattgaatggaatagttagcgattcc
aaggagaagcaagaatctcaaggggggtttgaagtgaagctcaaaaaggaagacaggggg
tttgatagtcgggttatgtttaaagatttaggtgggttgagtggagtaatcaatgaaata
atggagattatttaccctctgtttcatccggagatttatccttggctgggagttcagcca
atgaagggcattttgttacacggaccgcctggatgtgggaaaaccaaattggcgcatgcc
atagccaacgaggcaggcgttcccttctacaagatttcggctactgaagtggtttctgga
gtatcaggtgaatcagaagagaatattcgtaatttgttttcaaaagcattacaaacagct
ccctcaataatattcatagatgagattgatgctataagtgccaaaagagaaactttgcag
agggaaatggagcgtcgtattgtgatacaacttttgacctgcatggatgaatcgcatgag
accattatatctggtggccaagaatctgatgcagaaatgcctaaaaagaagtcggggcat
gttttagttattggggctacaaatagacctgattctctagatcctgcactccggaggcct
ggtcgctttgatcgtgagattgttctaggtgttccagatgaaaattcaagagttgagatc
ttgtcagtaattacaagagggttaagactagatggtttgtttgatttcaagaaaattgca
aaatgcacacctggttttgtaggtgcagacttgacagcactaaccagggaagcggcctca
gttgcaataaagagaatgatagcaagcaggaatccgcaaaatcttttaaaatgtgaggat
atagaggctactgaaaatgcatggtggaaaaaggcatggacacaagaagaaatgaataat
cttagtattacaatggcagatttcgaggaagctgcaacaaaggtgcaaccatcaactcga
agggagggattttctgccattccaaatgttaaatgggatgatgtaggggctcttggttct
ctgcgcaaggattttgaactgcatgttgttaggcggatcaagcacccagaggaatatgag
gctcttggaatggatttggataatggatttttgctttatggaccaccgggttgtggtaaa
actttggttgcaaaggctgtagccaatgaagccggggctaactttatacacattaagggt
ccagaacttttaaacaaatatgttggagaaagtgaacttgcaatccggacaatttttact
cgtgcacgcacttgctccccttgcatacttttctttgatgagattgatgctttgactacc
aaacggggtaaagatggtggctgggttgtagagcgtctgttgaatcagcttctcatagag
atggatggatcagaaaagcgcaagggtgtttttgtaattggagcaacaaatcgtccagaa
gtaatggatccagcagttttacggccaggacgatttggcaaactcctttatgttccgata
ccagatgcagagggaagagtttcaatattaaagacccttactcgaaagcgacctctttct
gcagaggttgaccttaattacattggccacagtcagtcttgtgagaacttcagtggtgct
gatcttgctgctcttgttaatgaagcttgcatgtgtgcattgcaagagagaattacaaca
gcagtggaggctgattcagatgttaggaagtatgctttggtggttaatctatcacacttt
gagcaagctttcaagagagttgtgccttctgtgtctaaagcgcaacggcattattatgaa
caagtatatcaaaaatttatggggctgactggaaatcactaa
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