Cryptomeria japonica (Japanese cedar): 131063646
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Entry
131063646 CDS
T10556
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131063646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131063646
03009 Ribosome biogenesis [BR:
cjf03009
]
131063646
Messenger RNA biogenesis [BR:
cjf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
131063646
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
Pre-60S particles
RNases
131063646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
131063646
NCBI-ProteinID:
XP_057853528
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All DBs
Position
4:355780838..355819311
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AA seq
216 aa
AA seq
DB search
MDRMSSNSSKVSLDSAEKRDGNGKDSSSHSFTPPLRRPLVWIDLEMTGLDVEKDRILEIA
CIITDGKLFEMVEGPDLIIYQPEEYLANMGEWCQEHHNASGLVEEVRKSKVTENEAEQQV
LEFVKKHTGPVQPLLAGNSVYMDFMFLRKYMPLLADAFSHVLVDVSSIKALCCRWYPKDA
ERAPAKKKSHRAREDIKESITELKYLKQTIFKASKR
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggatagaatgagcagcaattcctcaaaggtgtccctcgattctgcggagaagagggac
gggaatggcaaggactcttcttcacactcattcactccgccacttagacgccctctcgta
tggattgacttggaaatgacaggtttggatgttgaaaaggacagaattttggagattgct
tgtatcattactgatggaaaactttttgaaatggtcgagggtccagatctaataatatat
caacctgaggaatatttggcaaatatgggtgaatggtgtcaggagcaccataatgcaagt
ggacttgttgaagaggtccgaaaaagcaaagtgacagaaaatgaagctgagcaacaggtt
ttggaatttgttaagaagcacacaggtcctgttcagcctcttcttgctggcaattcagtc
tatatggatttcatgttccttaggaagtacatgccactcttggctgatgcattttcacat
gtgcttgttgatgttagtagtatcaaggcattatgctgtcgctggtatccaaaagatgca
gaaagagctcctgctaagaagaaatcacatcgggcccgtgaagatatcaaagaaagcata
actgagctcaagtatttgaagcaaaccattttcaaggcctcgaaaagatga
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