Cryptomeria japonica (Japanese cedar): 131063800
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Entry
131063800 CDS
T10556
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO isoform X1
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131063800
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131063800
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131063800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
Pep1_7
RINGv
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
131063800
NCBI-ProteinID:
XP_057853725
LinkDB
All DBs
Position
1:689803979..689808250
Genome browser
AA seq
225 aa
AA seq
DB search
MGGLYDACDQMSKLLCMNRQRFCEGLLSPAKKRNFEMGLSSFPNTVSEGVLPILIVNTAL
SFAIIKDILRSILQIVGLSPYTEPESIDPSWPESNITPDMSYVHPEAQLIAEEIRQSLPI
KRFQSDNESSSNEDDDGHVECAVCLSKFEEGDEIRQLPCCHFFHRLCLDKWLDHQQITCP
LCRSCLLTEDAAQKMRLSEQALTDELIFWYSSFQESGYHGMWIER
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgggcggactctacgatgcatgtgaccagatgtctaaacttctatgcatgaatcgtcaa
aggttttgtgaagggttgctctctcctgcaaagaaaaggaattttgaaatgggtctctca
agcttccccaacactgtctcagaaggtgttttgccaattttgattgttaacacagcccta
tcttttgctattatcaaggatatcttgagatccatcctccagattgtaggtctctctcca
tatactgaacctgaatccattgatccatcatggcctgagagtaatattacccctgacatg
tcctatgtacatccagaagcgcagctcattgcagaagaaatcaggcagagcctacccatc
aagagattccaatctgataatgaatcttcaagcaatgaagacgatgatggccatgttgag
tgtgcagtttgtttgtccaagtttgaagagggggatgagattaggcagctgccctgctgc
cactttttccacagactctgccttgacaagtggctggaccatcagcagatcacctgccct
ctgtgcagatcatgtctcttaaccgaggatgcagcacagaaaatgaggctcagcgaacag
gcccttacagatgaactcatattctggtactcttccttccaagaatctggctatcatggg
atgtggattgagaggtaa
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